Transcript Information: R_Transcript_143906.p1


Annotated TAIR IDAT2G47580.1
Annotated Gene Namespliceosomal protein U1A
Annotated Gene Symbol(s)U1A
Annotation TypeOrtholog
Chromosome Positionchr2:19517229-19518686 | Forward length=250
E-Value8.5E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.444669675416
Replicate 249.803224587459
Replicate 356.991963139227
Condition 2: 8 Hour
Replicate 148.482012595545
Replicate 249.730601214797
Replicate 364.692340251059
Condition 3: 24 Hour
Replicate 173.281320670832
Replicate 266.430439778419
Replicate 378.533084416588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_143906.p1 GENE.R_Transcript_143906~~R_Transcript_143906.p1 ORF type:complete len:250 (+),score=50.47,RRM_1|PF00076.18|2.2e+03,RRM_1|PF00076.18|1.2e-08,RRM_1|PF00076.18|1.9e-12,RRM_5|PF13893.2|6.6e-12,RRM_5|PF13893.2|1.7,RRM_6|PF14259.2|0.0032,RRM_6|PF14259.2|0.02 R_Transcript_143906:129-878(+)
ATGGCGGAGGTGCCTAATCCTGGCAGTGATATTCCTCCTAATCAGACTATTTACATCAACAACCTCAACGAAAAGATTAAGCTTGACGTATTTTCTCTTTGTGTAGAGCTGAAGAAGTCGATAATGGCGGTATTTTCGCAATTCGGGAAGATAATAGAAGTGTTAGCATTCAAGACGTTGAAACACAAAGGCCAAGCTTGGGTTGTCTTTGATGACGTTTCTTCTGCTACCAATGCTCTTCGTCAAATGCAAGGCTTTCCTTTCTATGACAAGCCTATGAGAATACAATATGCAAAGACCAAGTCAGATGTAATTGCAAAAGCTGATGGTACCTTTGTTCCAAGAGAAAAACGAAAGAAGCATGAAGAGAGAGGTAAGAAGCGGAAAGAGCAACAAGATCCAAATCTAGCAGCAGCAGGCTTGAATTATCCTGGAGCATATGGCGTAGCTCCTCCTCTTTCACAAATACCATATATGGGTGGTGCAAAGCCAGTTGTTCCTGAGGCTCCGGCTGCTCCAAATAACATACTTTTTGTTCAGAATCTTCCTCATGAGACCACTCCATTGATGCTGCAAGTGCTTTTCAGACAATACCCAGGCTTTAAGGAGGTTCGTATGATCGATGCGAAGCCAGGTATTGCTTTTGTAGAGTATGAAAATGAAATGCAATCAACAGTTGCAATGCATGCACTCCAGAATTTCAAGATTGTGGGACAGAACGCCATGGTTATAACATATGCGAAGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_143906.p1 GENE.R_Transcript_143906~~R_Transcript_143906.p1 ORF type:complete len:250 (+),score=50.47,RRM_1|PF00076.18|2.2e+03,RRM_1|PF00076.18|1.2e-08,RRM_1|PF00076.18|1.9e-12,RRM_5|PF13893.2|6.6e-12,RRM_5|PF13893.2|1.7,RRM_6|PF14259.2|0.0032,RRM_6|PF14259.2|0.02 R_Transcript_143906:129-878(+)
MAEVPNPGSDIPPNQTIYINNLNEKIKLDVFSLCVELKKSIMAVFSQFGKIIEVLAFKTLKHKGQAWVVFDDVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPREKRKKHEERGKKRKEQQDPNLAAAGLNYPGAYGVAPPLSQIPYMGGAKPVVPEAPAAPNNILFVQNLPHETTPLMLQVLFRQYPGFKEVRMIDAKPGIAFVEYENEMQSTVAMHALQNFKIVGQNAMVITYAKK*

Click here to download the sequence:
Link to NCBI Protein BLAST