Transcript Information: R_Transcript_144006.p1


Annotated TAIR IDAT4G38495.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18007466-18008025 | Reverse length=124
E-Value4.3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7807766785091
Replicate 21.5363146646072
Replicate 31.1174018339587
Condition 2: 8 Hour
Replicate 11.194432436451
Replicate 20.54538736198014
Replicate 30.59029628033779
Condition 3: 24 Hour
Replicate 12.7997325887444
Replicate 21.9724215267996
Replicate 31.6015393673339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144006.p1 GENE.R_Transcript_144006~~R_Transcript_144006.p1 ORF type:complete len:123 (+),score=11.40 R_Transcript_144006:659-1027(+)
ATGGAGTCAGCACCAAAAAAAAAAAAAAAGAATAACATGGAGAGAGAGGTGATAGAGGCAGAGCTGGTCTTGCCCACCCACATGAAGTTCAAGAAGATTCAAATGTATGAGAAATACCCTAAAGGTCAATCTAGGTCTCGCCATTGGAAACATCTTAAACAAATTCTCCAGGCTGAGAATTCTCACAACTTCCCTCCTCATGAACCCAATTGTAAGTCGCTTCTTTTTTCTTTTCTTTGTAGCTACTTCAATTTTCTGCTTAACCATCAAATCAAAGGCTTTTGGGGGCCAGGCGAAAAAAACGAACAAAGACCCCATCTTTATGCCTCTGTTGATTTCGGGAAAAAAAACAAATTAGGGTTTCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144006.p1 GENE.R_Transcript_144006~~R_Transcript_144006.p1 ORF type:complete len:123 (+),score=11.40 R_Transcript_144006:659-1027(+)
MESAPKKKKKNNMEREVIEAELVLPTHMKFKKIQMYEKYPKGQSRSRHWKHLKQILQAENSHNFPPHEPNCKSLLFSFLCSYFNFLLNHQIKGFWGPGEKNEQRPHLYASVDFGKKNKLGFR*

Click here to download the sequence:
Link to NCBI Protein BLAST