Transcript Information: R_Transcript_144012.p1


Annotated TAIR IDAT4G38495.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18007466-18008025 | Reverse length=124
E-Value2.4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.779891619697
Replicate 224.674484430832
Replicate 331.266860806427
Condition 2: 8 Hour
Replicate 119.838912475505
Replicate 224.156281113106
Replicate 327.691143209203
Condition 3: 24 Hour
Replicate 129.493241402014
Replicate 223.02118263761
Replicate 329.556389540701


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144012.p1 GENE.R_Transcript_144012~~R_Transcript_144012.p1 ORF type:complete len:137 (+),score=24.12,YL1_C|PF08265.7|9.9e-15 R_Transcript_144012:659-1069(+)
ATGGAGTCAGCACCAAAAAAAAAAAAAAAGAATAACATGGAGAGAGAGGTGATAGAGGCAGAGCTGGTCTTGCCCACCCACATGAAGTTCAAGAAGATTCAAATGTATGAGAAATACCCTAAAGGTCAATCTAGGTCTCGCCATTGGAAACATCTTAAACAAATTCTCCAGGCTGAGAATTCTCACAACTTCCCTCCTCATGAACCCAATTATGTCAATATTGAGTCACCTCCTTCAATGCATCCTCCAATGAGAATTTGTGATATTACAGGATATGAGGCACCTTATCATGATCCAAGGACCAAACTGCGTTATGCCAATACTGAAGTCTTTAAGCTCATAAGGTCACTTCCTAATGAGTATGTGCAACGGTACTTGGCTCTTAGAAATGCAGCTGTCGTCCTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144012.p1 GENE.R_Transcript_144012~~R_Transcript_144012.p1 ORF type:complete len:137 (+),score=24.12,YL1_C|PF08265.7|9.9e-15 R_Transcript_144012:659-1069(+)
MESAPKKKKKNNMEREVIEAELVLPTHMKFKKIQMYEKYPKGQSRSRHWKHLKQILQAENSHNFPPHEPNYVNIESPPSMHPPMRICDITGYEAPYHDPRTKLRYANTEVFKLIRSLPNEYVQRYLALRNAAVVLK*

Click here to download the sequence:
Link to NCBI Protein BLAST