Transcript Information: R_Transcript_144098.p1


Annotated TAIR IDAT1G34160.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12441393-12443225 | Forward length=581
E-Value1.6E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0719020694885
Replicate 20.7750312234204
Replicate 31.1530237045043
Condition 2: 8 Hour
Replicate 10.86275698639622
Replicate 20.90043819494707
Replicate 31.8273433510457
Condition 3: 24 Hour
Replicate 11.3096735666811
Replicate 21.0361531022419
Replicate 31.5791464790882


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144098.p1 GENE.R_Transcript_144098~~R_Transcript_144098.p1 ORF type:5prime_partial len:596 (+),score=107.97,PPR|PF01535.16|20,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.00027,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|5.2e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.61,PPR|PF01535.16|2.4e+03,PPR_2|PF13041.2|9.5e-05,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|0.0097,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|6.8e-10,PPR_2|PF13041.2|0.00072,PPR_2|PF13041.2|14,PPR_2|PF13041.2|4.1e+02,DYW_deaminase|PF14432.2|5.6e-38,PPR_1|PF12854.3|7.4e+02,PPR_1|PF12854.3|0.0098,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|9.6e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|26,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|1.4e+03 R_Transcript_144098:1-1788(+)
GATCTAAACTGTCTACACCACCACCACAACCTCCACCGCATGACCACCAAGCCCACCACCGTCCTCATCGACACTCTAATACAAAAGTGCAACTCTCTCTCACGCATCAAACAAATCCAATCCCACCTCGTTACCACCGGCCTTTTCCAATCATCTTTCTCTTCTCACCGCACAAAGCTCTTAGAGCTCACTTCCATCTCCTCCTATGGAAACCTCTCGTACGCTACACTCATCTTCAGTTCCATCAAAACTCCATCAACCTACGATTGGAATGCCATCATTCGAGGCCATGCCCAAAGCCCAACTCCCCAAACTGCCCTTGCCCTGTTCCTTTCCATGTTGAGAGCTTCACAAAAGCCTGACGCTCTCACGTGCTCTTTTGCGCTTAAGGCCTGCGCACGTGCCTTGGCCAAGACTGAAACTCGTTGTATACATTCTCACGTGATTCGATCAGGGTTCAAGGCAGATTTGCTTTTGGAGACCACTTTGTTGGATGTTTATGCAAAAGTTGGGGAGTTTCGAGATGCTAAGAAGGTGTTCGATGAAATGCCTCAGAGAGATTTGGCTACTTGGAATGCGTTGATTTGTGGGTTTGCTCAAGGGAGTTTCCCTAATGAGGCTTTGGAGCTGTTTTATAAGATATGTGGGTTGGGTTTGAAGGGTGATGAAATCACTGTGCTTGGAGCTCTTTCTGCGTGCTCTCAAGTGGGGTCTGTGAAAGAGGGTAATAAGGTGTGGGGTTATATAAAAGAGGAGAGTTTAGATATGACTCTGAATGTTTGTAATGCAGTGATTGATATGTATAGTAAATGTGGGTTTGTGGATAAAGCCTATGATGTCTTTAGGAACATGAAGTGTGGGAAGAGTATCATAACGTGGAACACCATGATTATGGGGTTTGCTATGCATGGGCATGGCGTGGAAGCAATGGAGCTTCTTGAGGAGATGGGTAGAGTTGGGGTTCGCCCTGATCCAATAAGCTATCTTGCTGTGTTGTGTGCCTGTAATCATGCGGGTTTGGTTGATGAGGGGTTTGAGTTGTTTAACTCGATGGAGGATAAAGGGATTGCTCGTAATGTGAAGCATTATGGTACTGCTGTTGATTTGTTAGGAAGGGCAGGGAGGGTTTATGAGGCTTATGAAATTATTAAGTCAATGCCTATTGTGCCTGATATTGTCCTGTGGCAAACATTGCTTGGTGCTTGCAAGACTTATGGGAATGTGGAGTTAGCTGAGATTGCGTCAAGGAAACTTGTTGGGATGGGATCAGATAGCTGTGGGAACTTTGTCCTGTTATCGAATATCTACGCTACGTATGAGAGGTGGAAGGATGTAGGGAGGGTTAGGGAGGCGATGAATAATAGGGATGTGAAGAAGGTGCCTGGGTTTAGCTACATTGAAGTGGATGGTGTTCTGCACAAGTTCATTAATGGAGATCAGAGGCACCCAGATTGGAAAGAGATCTATACAAAGTTGGATGAAATCATGTACAGGATTAAGGAGCACGGATATGTGCCAGGGACTAGAGTTGTGTTGCATGACATAGGAGAGGAGGATAAAGAGTACTCATTGTCTTATCATAGTGAAAAGTTGGCTGTAGCCTTTGGGTTACTAAAAACCAGCCAAGGAACCCCTATTCAAGTTATTAAGAACCTTCGGATATGTGTGGATTGTCATGCAGTTATTAAGCTTGTTTCAAAAGTTTATAATCGTGAGATTATAGTTAGGGATCGAGCTCGCTTTCATCGGTTCAGGGATGGGGCTTGTTCTTGTAGGGATTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144098.p1 GENE.R_Transcript_144098~~R_Transcript_144098.p1 ORF type:5prime_partial len:596 (+),score=107.97,PPR|PF01535.16|20,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.00027,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|5.2e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.61,PPR|PF01535.16|2.4e+03,PPR_2|PF13041.2|9.5e-05,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|0.0097,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|6.8e-10,PPR_2|PF13041.2|0.00072,PPR_2|PF13041.2|14,PPR_2|PF13041.2|4.1e+02,DYW_deaminase|PF14432.2|5.6e-38,PPR_1|PF12854.3|7.4e+02,PPR_1|PF12854.3|0.0098,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|9.6e+03,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|26,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|1.4e+03 R_Transcript_144098:1-1788(+)
DLNCLHHHHNLHRMTTKPTTVLIDTLIQKCNSLSRIKQIQSHLVTTGLFQSSFSSHRTKLLELTSISSYGNLSYATLIFSSIKTPSTYDWNAIIRGHAQSPTPQTALALFLSMLRASQKPDALTCSFALKACARALAKTETRCIHSHVIRSGFKADLLLETTLLDVYAKVGEFRDAKKVFDEMPQRDLATWNALICGFAQGSFPNEALELFYKICGLGLKGDEITVLGALSACSQVGSVKEGNKVWGYIKEESLDMTLNVCNAVIDMYSKCGFVDKAYDVFRNMKCGKSIITWNTMIMGFAMHGHGVEAMELLEEMGRVGVRPDPISYLAVLCACNHAGLVDEGFELFNSMEDKGIARNVKHYGTAVDLLGRAGRVYEAYEIIKSMPIVPDIVLWQTLLGACKTYGNVELAEIASRKLVGMGSDSCGNFVLLSNIYATYERWKDVGRVREAMNNRDVKKVPGFSYIEVDGVLHKFINGDQRHPDWKEIYTKLDEIMYRIKEHGYVPGTRVVLHDIGEEDKEYSLSYHSEKLAVAFGLLKTSQGTPIQVIKNLRICVDCHAVIKLVSKVYNREIIVRDRARFHRFRDGACSCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST