Transcript Information: R_Transcript_144294.p1


Annotated TAIR IDAT5G12010.1
Annotated Gene Nameunknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3877975-3879483 | Reverse length=502
E-Value3.3E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0161061409551
Replicate 21.7807513173586
Replicate 31.4006092021316
Condition 2: 8 Hour
Replicate 11.25568538191
Replicate 24.7632647709034
Replicate 36.6949727534761
Condition 3: 24 Hour
Replicate 11.4942951449985
Replicate 21.827062866675
Replicate 32.4175768490459


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144294.p1 GENE.R_Transcript_144294~~R_Transcript_144294.p1 ORF type:complete len:507 (+),score=38.80,DDE_Tnp_4|PF13359.2|1.4e-38 R_Transcript_144294:78-1598(+)
ATGGAAATCACTTGTTTCCCTTTTCTTCCATCTGAAGATTTCTCACCCCAATTCTACTCTTCTCCATACCCTGAACTCGAACTCGAACCCGCCATTACTACTGCTGTTGCTTCTCAGCCTGCTTTGAAAAAGCGCCGTAAAGACGACCACTTGGTGATTGATGACAGTACCAATTCGACGGCCATTAAGGAGATTTTAGCTTCTCTGCTGATGCTAGATGAGGACGACAATAAGGTAGGAGACAACAATCACACCGATGACAATAATAATAATTGGTTGATTAGTAGCAGTGCGAGTGATCGGGAGGAGGAGCAGATAGGCGACAATCGGAACACCGTTATGAACAACCACGAGTCGTCGGAGATTAAACAGAGTGGTGGTAACAAGCGATCGAGAACTGCTACCACGACAACAATGGCGGCGACTGAAGGAGCAGGGGGTGGGGGCGGCCACCAGAGGAGGCTTTGGGTGAAGGACAGGTCTAAGGACTGGTGGGACAAGTTCAGCCACCGGGATTTACCAGACGAGGAGTTCCGAAAAGCATTTCGAATGAGCAAAGCAACCTTTGAAATGATCTGCGAGGAACTGGACCCAATTATCACCAAAAAGGACACCATGCTACGAACCGCCATCCCTGTTCGCCAGCGAGTCGCTGTCTGTGTGTCGCGACTCGCTACAGGCGAACCGCTTCGGCTTTTATCGAAGCGGTTTGGGTTGGGGATCTCCACCTGCCACAAACTGGTGCTCGAGGTCTGCGCTGCGATCAAAACCGCCCTGATGCCGAAATTCCTCCAGTGGCCGGACCAAGCTCGGTTGGACCGGATCAAGGAGGAATTCGAGGCCGGTTCAGGGATCCCAAACGTGGGGGGTTCCATGTACACGACCCACATACCCATCATCGCCCCGAAGATCAGCGTAGCAGCATACTTCAACAAGCGCCACACAGAACGCAACCAAAAGACCAGCTATTCAATCACAGTCCAAGGAGTGGTCGACCCGAATGGCATCTTCACGGATGTTTGTATCGGGTGGCCCGGATCCATGCCCGACGATCAAGTGCTGGAAAAATCGGCCCTCTTCCAACGGGCGAACCGGGGTTTATTAAACAACGTTTGGATGGTGGGGACATCCGGTTTTCCCTTAATGGACTGGGTTTTGGTTCCTTACACCCACCCGAATCTCACATGGACCCAACACGCGTTCAATGAGAAGATTGGGGAAGTCCAAAATGTTGCGAGGGGGGCATTTTCGAAATTAAAGGCAAGATGGGGTTGCTTGCAAAAGAGAACTGAAGTGAAACTCCAAGACTTGCCTGTAGTCTTAGGAGCTTGCTGTGTTCTCCACAACATCTGTGAGTCTAGAAATGAAGTTGTTGATACAGAGCTTTTTGAGACGTTCGAGCTCTTCGACGACGAGATGGTCCCGGAAAATTCCATCCGATCGGCCACGGCGGTTCAGGCGAGAGACCACATTGCCCATAATCTCTTGCATCATGGCTTGGCTGGCACCTCTTTTCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144294.p1 GENE.R_Transcript_144294~~R_Transcript_144294.p1 ORF type:complete len:507 (+),score=38.80,DDE_Tnp_4|PF13359.2|1.4e-38 R_Transcript_144294:78-1598(+)
MEITCFPFLPSEDFSPQFYSSPYPELELEPAITTAVASQPALKKRRKDDHLVIDDSTNSTAIKEILASLLMLDEDDNKVGDNNHTDDNNNNWLISSSASDREEEQIGDNRNTVMNNHESSEIKQSGGNKRSRTATTTTMAATEGAGGGGGHQRRLWVKDRSKDWWDKFSHRDLPDEEFRKAFRMSKATFEMICEELDPIITKKDTMLRTAIPVRQRVAVCVSRLATGEPLRLLSKRFGLGISTCHKLVLEVCAAIKTALMPKFLQWPDQARLDRIKEEFEAGSGIPNVGGSMYTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPNGIFTDVCIGWPGSMPDDQVLEKSALFQRANRGLLNNVWMVGTSGFPLMDWVLVPYTHPNLTWTQHAFNEKIGEVQNVARGAFSKLKARWGCLQKRTEVKLQDLPVVLGACCVLHNICESRNEVVDTELFETFELFDDEMVPENSIRSATAVQARDHIAHNLLHHGLAGTSFL*

Click here to download the sequence:
Link to NCBI Protein BLAST