Transcript Information: R_Transcript_144361.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2829557220569
Replicate 20.80496998401143
Replicate 31.6100582335954
Condition 2: 8 Hour
Replicate 11.0952144065861
Replicate 21.8574534436768
Replicate 31.3338244225844
Condition 3: 24 Hour
Replicate 12.4938193154695
Replicate 21.7616021478097
Replicate 31.5384329172899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144361.p1 GENE.R_Transcript_144361~~R_Transcript_144361.p1 ORF type:5prime_partial len:313 (+),score=40.11,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|9e-07,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|5.3e-15,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|3.8e-16,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|5e-10,PPR_1|PF12854.3|7.2e-09,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|2.3e-07,PPR_1|PF12854.3|1e-08,PPR|PF01535.16|5.6,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.3,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|6.1e-07,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|3.1e-07,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.0012,RPM2|PF08579.7|0.0067,RPM2|PF08579.7|31,RPM2|PF08579.7|1.3e+02,MRP-S27|PF10037.5|0.055,MRP-S27|PF10037.5|38,MRP-S27|PF10037.5|3,MRP-S27|PF10037.5|57 R_Transcript_144361:2-940(+)
GTGTACAGTTTTATGCAAACGCATAACATAATTCCAGATGCAGTAACCCACAGTTTGTTTTTTAAAGCACTGATTGCGCAGGGGAAACTCAACATGGCATTGGCGCTCTTCTTTCAATTGCTTAAGCAAGGTCTGTCTTTGGATTCCATTGCATATTGCATGCTGATTGACGCCTTTTGCAGGCAAAACAAACTCGAATCTGTATTATGGCTTTTCCAGCTAATGCTAAGGCATCAGTTGAAACCTGATATTACCTTGTACAATGTTCTCCTTAAAAGTCTGTTCAAAGATTGCCGGCTCGAAGATGCAGGAAACCTTTTCCAGCAACTTCTTAATTATGGACCAGAGCCCGATATTGTGACCTACAACTCTATGATTAGTGGTTATTGTGCTTCAGAAAAGTTGAATGAGGCAATGGAGCTATATGAAACACTCTCATACAGGAAAATCAGACGCACTGTAGTCACTGCTACCATTCTGATTGATGCACTTTGTAAGAAAGGCAGACTGAATGAGGCAGTGCTGGTATTTCGTAGGATGCTAAAAGAGGATCTTGAGCCTAGTGTTGTTACTTATAGTTGTTTAGTTGATGGGTACTTCAAATATTCTAGCATGGAAGGTGCATTTGAACTATTTGAAGAGATGAATAACAACAAAATCAAACCCACTATTGTCAGTTTTAGCATTCTAATGGATGGCCTGTGCAAAAGAGGATTAATGGAGGCGGCATTTAGCACCTTCCGTTCTGCCATTAACAGGGGTTTGTTGGCTGATATTGTAGCTTATACTATTCTTATTCATGGTTGCTGCAAAGTTAGGAGGATAAATGAAGCGAAACAGCTTTATAGACAAATGCTGGCTGAGGGTTTGATCCCTGATCCTTTGTTAAATAGAATAATTGTAGAATATAGCCTGGCTGATGAAAGCAAAACTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144361.p1 GENE.R_Transcript_144361~~R_Transcript_144361.p1 ORF type:5prime_partial len:313 (+),score=40.11,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|9e-07,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|5.3e-15,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|3.8e-16,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|5e-10,PPR_1|PF12854.3|7.2e-09,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|2.3e-07,PPR_1|PF12854.3|1e-08,PPR|PF01535.16|5.6,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.3,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|6.1e-07,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|3.1e-07,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.0012,RPM2|PF08579.7|0.0067,RPM2|PF08579.7|31,RPM2|PF08579.7|1.3e+02,MRP-S27|PF10037.5|0.055,MRP-S27|PF10037.5|38,MRP-S27|PF10037.5|3,MRP-S27|PF10037.5|57 R_Transcript_144361:2-940(+)
VYSFMQTHNIIPDAVTHSLFFKALIAQGKLNMALALFFQLLKQGLSLDSIAYCMLIDAFCRQNKLESVLWLFQLMLRHQLKPDITLYNVLLKSLFKDCRLEDAGNLFQQLLNYGPEPDIVTYNSMISGYCASEKLNEAMELYETLSYRKIRRTVVTATILIDALCKKGRLNEAVLVFRRMLKEDLEPSVVTYSCLVDGYFKYSSMEGAFELFEEMNNNKIKPTIVSFSILMDGLCKRGLMEAAFSTFRSAINRGLLADIVAYTILIHGCCKVRRINEAKQLYRQMLAEGLIPDPLLNRIIVEYSLADESKTF*

Click here to download the sequence:
Link to NCBI Protein BLAST