Transcript Information: R_Transcript_144504.p1


Annotated TAIR IDAT5G18450.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6116097-6117020 | Reverse length=307
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4921016801645
Replicate 21.0072026029959
Replicate 32.1976943819187
Condition 2: 8 Hour
Replicate 14.9694559856033
Replicate 24.7032113097697
Replicate 36.363110734084
Condition 3: 24 Hour
Replicate 11.186012181505
Replicate 22.2787721362958
Replicate 32.746058890607


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144504.p1 GENE.R_Transcript_144504~~R_Transcript_144504.p1 ORF type:3prime_partial len:271 (+),score=67.91,AP2|PF00847.16|5.4e+03,AP2|PF00847.16|1e-12 R_Transcript_144504:599-1408(+)
ATGATAGAGCTTTTGGCTTGTTATCTGGTTGTTGCAGATTGTGATCGAACTAGTTGTGACTGGGTGCTCAGGAGAGAATTTAATTTGATTCTGTGTTCTTCTTCGCCGGAATCTTGTTTGAATTTCTTCGTTTGTTCGAGCAAGAGGAAGAGGAAGTCTTGGAGTAGGCGTGATGGCTCTACTAATTCAGTGGCTGAAACCCTTGCTAAATGGAAAGAAATTAACAGCAAACTCGAGGAGGGGAAGCCTGTTCGTAAACCCCCTGCTAAGGGTTCAAAGAAAGGATGTATGAAAGGTAAAGGTGGTCCTGACAATGCTCGGTGCAATTATAGAGGAGTTAGGCAGAGGACTTGGGGTAAATGGGTTGCTGAGATCAGAGAGCCAAACAGAGGTAGTAGGCTCTGGCTTGGTACTTTCCCTACTGCCGTTGAAGCTGCTTTGGCTTATGATGAGGCTGCAAGGACCATGTATGGACAGACTGCTCGCTTGAACTTACCTAATTACCCTTCTCCATTGAGGGATTCTTCTGCTACAACAACTACAACCACTACATCATATACCGAGTCTTCTGATAATCATTCTGAAGTGTGTGGGGGTGATCAGCTAGAGCCTGAGTTGAAGATTTGTAGGACGTCAAAGCAAGAAGATGGTGAAAGTGAATCAGTATTCAACCTTGACGGAGCTCAAATAGCATTTGAGGCAGGGGCTTTGGCCATTCCTGTCAAGAAGGAACCAGCACAACAGGAGGCTGACAATGTGGAAGGCTGTATCGACATCAATGACTACTTGCAGAACTTCCCAACGGATCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144504.p1 GENE.R_Transcript_144504~~R_Transcript_144504.p1 ORF type:3prime_partial len:271 (+),score=67.91,AP2|PF00847.16|5.4e+03,AP2|PF00847.16|1e-12 R_Transcript_144504:599-1408(+)
MIELLACYLVVADCDRTSCDWVLRREFNLILCSSSPESCLNFFVCSSKRKRKSWSRRDGSTNSVAETLAKWKEINSKLEEGKPVRKPPAKGSKKGCMKGKGGPDNARCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAVEAALAYDEAARTMYGQTARLNLPNYPSPLRDSSATTTTTTTSYTESSDNHSEVCGGDQLEPELKICRTSKQEDGESESVFNLDGAQIAFEAGALAIPVKKEPAQQEADNVEGCIDINDYLQNFPTDQ

Click here to download the sequence:
Link to NCBI Protein BLAST