Transcript Information: R_Transcript_144505.p1


Annotated TAIR IDAT5G18450.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6116097-6117020 | Reverse length=307
E-Value5.7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8711889664434
Replicate 22.3830156914203
Replicate 33.2322390473099
Condition 2: 8 Hour
Replicate 18.7127617603695
Replicate 211.729174217309
Replicate 311.191637222999
Condition 3: 24 Hour
Replicate 17.7464993713112
Replicate 25.6152959752083
Replicate 35.7740570646416


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144505.p1 GENE.R_Transcript_144505~~R_Transcript_144505.p1 ORF type:complete len:326 (+),score=91.10,AP2|PF00847.16|1.4e-12 R_Transcript_144505:851-1828(+)
ATGGGAACTTTGAATTTCAATGAAGCTTCTTCTAACCCAGCTTCTTCTTCTATACCCTTTGATTACACCAGGAAGAGGAAGTCTTGGAGTAGGCGTGATGGCTCTACTACTAATTCAGTGGCTGAAACCCTTGCTAAATGGAAAGAAATTAACAGCAAACTCGAGGAGGGGAAGCCTGTTCGTAAACCCCCTGCTAAGGGTTCAAAGAAAGGATGTATGAAAGGTAAAGGTGGTCCTGACAATGCTCGGTGCAATTATAGAGGAGTTAGGCAGAGGACTTGGGGTAAATGGGTTGCTGAGATCAGAGAGCCAAACAGAGGTAGTAGGCTCTGGCTTGGTACTTTCCCTACTGCCGTTGAAGCTGCTTTGGCTTATGATGAGGCTGCAAGGACCATGTATGGACAGACTGCTCGCTTGAACTTACCTAATTACCCTTCTTCTCCATTGAGGGATTCTTTTGAGAGAACAACTACTACCACTACATCGTATACTGAGTCTTCTGATAATCATTCTGAAGTGTGTGGGGGTGATCAGCTAGAGCCTGAGTTGAAGATTTGTAGGACGTCAAAGCAAGAAGATGGTGAAAGTGAATCAGTATTCAACCTTGACGGAGCTCAAATAGCATTTGAGGCAGGGGCTTTGGCCATTCCTGTCAAGAAGGAACCAGCACAACAGGAGGCTGACAATGTGGAAGGCTGTATCGACATCAATGACTACTTGCAGAACTTCCCAACGGATCAGAACTTCCCAATGGATCAGAACTTCCCAACGGATCAGAACTTCCCAATGGATCAGAACTTCCCAACGGATCAGAACCTCCCAATGGATCAGAACTTCTCGGTGGATGAAATGTTTGATGTTGATGAGCTTCTGGGAGAGTTAAATGCTGGTCCTGTGTCCGAGCCATTTGACACTTTCCATTTTGAAAAGGGTGCATCATTGCTCCAGGATCCCTTGCTCTGGATGGAGGGGGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144505.p1 GENE.R_Transcript_144505~~R_Transcript_144505.p1 ORF type:complete len:326 (+),score=91.10,AP2|PF00847.16|1.4e-12 R_Transcript_144505:851-1828(+)
MGTLNFNEASSNPASSSIPFDYTRKRKSWSRRDGSTTNSVAETLAKWKEINSKLEEGKPVRKPPAKGSKKGCMKGKGGPDNARCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAVEAALAYDEAARTMYGQTARLNLPNYPSSPLRDSFERTTTTTTSYTESSDNHSEVCGGDQLEPELKICRTSKQEDGESESVFNLDGAQIAFEAGALAIPVKKEPAQQEADNVEGCIDINDYLQNFPTDQNFPMDQNFPTDQNFPMDQNFPTDQNLPMDQNFSVDEMFDVDELLGELNAGPVSEPFDTFHFEKGASLLQDPLLWMEGV*

Click here to download the sequence:
Link to NCBI Protein BLAST