Transcript Information: R_Transcript_144648.p1


Annotated TAIR IDAT3G04130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1084136-1085662 | Forward length=508
E-Value9.4E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78676555839305
Replicate 20.61540880530529
Replicate 30.90837062881294
Condition 2: 8 Hour
Replicate 10.46438709382706
Replicate 21.0409376029517
Replicate 31.1266516936792
Condition 3: 24 Hour
Replicate 11.5041321976772
Replicate 20.91263140236872
Replicate 30.98117296872298


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144648.p1 GENE.R_Transcript_144648~~R_Transcript_144648.p1 ORF type:5prime_partial len:580 (+),score=98.32,PPR_2|PF13041.2|0.53,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|5.2e-08,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|5.8e-12,PPR_2|PF13041.2|6.3e-12,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|6e-08,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|8.2e-06,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.7e-05,PPR_1|PF12854.3|0.027,PPR_1|PF12854.3|6.2e-10,PPR_1|PF12854.3|35,PPR_1|PF12854.3|1.6e-08,PPR|PF01535.16|0.041,PPR|PF01535.16|0.18,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0012,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.09,PPR|PF01535.16|0.075,PPR|PF01535.16|5.4e-08,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|1.2e-06,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|27,PPR_3|PF13812.2|36,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|4.5e-05,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.5 R_Transcript_144648:2-1741(+)
GAAGACCCATTTGAAATGTGCTTGTGTAGTTGTGTTGATTTTCTGTCTCCGCTCTTCGTCTCACTGAAACTCTCCTTTGCTCCTCCACACAATTCAAGTTCAACCAGAGCAAAAAAACCACCCAGAAACAAGCAACTATTCAGGAGTTGTAACCAAATGCAGCACCTTAAGTTGATGACCCATATAAGAAATTGTTCCAATGATAGGGTTTTTAAGATGTTCATTGGGTCAGCACCTTTGAATTTGGTTCATGCTTCTTATGCCAAAGGACGTTGTTATGCAACTAATACCAATTTTGCCCCTTGCCCAAGTGGAGAAGTTGGGGAGACCACCAATAGTTTGTCTGACATTGATGTACTTGTCAATAAAATATGTCATTTGAATGGTGAGAATGAGGTTATGGGTTCTTTGATTAATGATGAAGTTTGTGGTGCAATTAGTATTAGCCATACCCTTGTTGACACCTTGTTGTGTCGTTTCAAAGACGATTGGAAATCTGCGTTGAGTGGTTTTAGATGGGCAGCATTGCACCCTTGTTATGAGCACTTGCCCGAATCATGGGATTTGATGGTGGACATACTAGGGAAGGCTAGCCAGTTTGATAGGATGAGGGAATTGGTGGGTGAAATGCGTGAGCGGAATTTGGTAACCCTAAAGACTGTGGCTATAATTATGAGAAGGTTTTGTAATGCTCGTCGATGGGAGGATGCTGTGAGGATGTTTGATGAGTTGGGTACTTTTGGGTTGGAGAAGAATAGCGAGTCCATGAATGTGTTGCTTGATACCCTTTGCAAAGAGAAACAAGTTGAAATGGCCCGTGGGATCTTCTTGGAACTTAAATCACATATTCCACCTAGTGCTCATACTTTTAACATCTTTGTTTATGGTTGGTGCAAAATCAAGCGGGTTGAAGAAGCGTATTGGACACTTCGAGAGATGAAGGGGTACGGCTTTGCTCCATCTGTGATAAGCTTCTCAATTATCATTCAATCGTACTGTAAACAGTCTAATTGGGATAAGGTGTTTGAGTTACTAGAAGTGATGGAAGCCCAGGGCTGCCAACCTAGTGTTGTTACTTACACAGTTGTAATTTCCTCTTTAGCAAAGGCTGAGAAACTTGAAGTGGCTCTGAATATAGCTGATAGAGCGAAATCTTCTGAATGTAAACCTGACACCTTGTTTTACAATTCATTGATATATACACTTGGACAGGCTTGGAAGTTGAGGGAAGCCTTTGACATTTTTAAGATTGAGATGCCTAAGAATGGTGTTACTCCAAATACTTCTACCTACAATACCTTGATAGACATGTTTTGCCGTCATGGTCAACTACAGATGGCTTCAGACATTCTTCAAGATATGGAGGACTCAGGAATCTGTAAACCAGATGTTAGGACATTCTTCCCGTTGCTTAAAGCCAGCTTCCGATCGGGAATGATAGATGGTTACTTGAACAAACTCTTGGAAGATATGGTTAAGAAGCATCATCTTAGTCTTGATGTTTCAACATATTCACTGTTGATTCACGGTTATTGTAGAGTTGATCGATGTGAATCGGCTTTCCATCTATTTGAGGAGATGATGTGCAAGGAGCTGACACCACTGTACCGTACTTGTCGGATGCTGTTGGATAAAGTTAAAGAAAGGAACATGTACGATGCTGCTGAAAGGGTTGAGCTTTATATGAAGCATTTGAAAGCTTCCCGAAAGCAGGGTTTTCCAGGTTCCAAGCAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144648.p1 GENE.R_Transcript_144648~~R_Transcript_144648.p1 ORF type:5prime_partial len:580 (+),score=98.32,PPR_2|PF13041.2|0.53,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|5.2e-08,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|5.8e-12,PPR_2|PF13041.2|6.3e-12,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|6e-08,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|8.2e-06,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.7e-05,PPR_1|PF12854.3|0.027,PPR_1|PF12854.3|6.2e-10,PPR_1|PF12854.3|35,PPR_1|PF12854.3|1.6e-08,PPR|PF01535.16|0.041,PPR|PF01535.16|0.18,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0012,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.09,PPR|PF01535.16|0.075,PPR|PF01535.16|5.4e-08,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|1.2e-06,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|27,PPR_3|PF13812.2|36,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|4.5e-05,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.5 R_Transcript_144648:2-1741(+)
EDPFEMCLCSCVDFLSPLFVSLKLSFAPPHNSSSTRAKKPPRNKQLFRSCNQMQHLKLMTHIRNCSNDRVFKMFIGSAPLNLVHASYAKGRCYATNTNFAPCPSGEVGETTNSLSDIDVLVNKICHLNGENEVMGSLINDEVCGAISISHTLVDTLLCRFKDDWKSALSGFRWAALHPCYEHLPESWDLMVDILGKASQFDRMRELVGEMRERNLVTLKTVAIIMRRFCNARRWEDAVRMFDELGTFGLEKNSESMNVLLDTLCKEKQVEMARGIFLELKSHIPPSAHTFNIFVYGWCKIKRVEEAYWTLREMKGYGFAPSVISFSIIIQSYCKQSNWDKVFELLEVMEAQGCQPSVVTYTVVISSLAKAEKLEVALNIADRAKSSECKPDTLFYNSLIYTLGQAWKLREAFDIFKIEMPKNGVTPNTSTYNTLIDMFCRHGQLQMASDILQDMEDSGICKPDVRTFFPLLKASFRSGMIDGYLNKLLEDMVKKHHLSLDVSTYSLLIHGYCRVDRCESAFHLFEEMMCKELTPLYRTCRMLLDKVKERNMYDAAERVELYMKHLKASRKQGFPGSKQA*

Click here to download the sequence:
Link to NCBI Protein BLAST