Transcript Information: R_Transcript_144681.p1


Annotated TAIR IDAT3G46290.1
Annotated Gene Namehercules receptor kinase 1
Annotated Gene Symbol(s)HERK1
Annotation TypeOrtholog
Chromosome Positionchr3:17013009-17015501 | Forward length=830
E-Value2.4E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5189146266853
Replicate 26.6952488572379
Replicate 34.7332799624703
Condition 2: 8 Hour
Replicate 14.6847955893964
Replicate 25.1338759329253
Replicate 37.3625155322488
Condition 3: 24 Hour
Replicate 15.0366617897514
Replicate 26.4702927867765
Replicate 34.5227144888742


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144681.p1 GENE.R_Transcript_144681~~R_Transcript_144681.p1 ORF type:5prime_partial len:392 (+),score=76.81,Pkinase_Tyr|PF07714.13|1.1e-47,Pkinase|PF00069.21|3.7e-46 R_Transcript_144681:1-1176(+)
GGTGTAGCAGTTGGGGCTCTGTCTGTTGTTGTGATTTTGGCTGTAATTGTCTTTCTGGTGTTAAGAAGAAATCGAGCATATCTTGGGGGAAAATCCACTGTCAATGGAGAATTTGGTTACCGTTTCTCTTTTGCTGCCATTCGAGAGGCTACTGATAACTTCAGTGAAAATCTGGTTGTTGGAGTGGGTGGTTTTGGGAAGGTTTACAAGGGAGTGTTGAAGGATGGCAGAAAGGTGGCTATTAAGAGGGGTAACACTGAATCCCAACAGGGTATTAATGAATTTCTAACTGAAATTGAAATGCTATCACACTTTCGCCACCGCCATCTAGTGTCTCTCATAGGATACTGTGATGATCAGAACGAGATGATCTTGTTGTACGAGTACATGGAAAATGGGACACTTAAGAGCCATCTATATGGCTCGAATAACCCCGTCTTGAGCTGGAAACAAAGACTCGAGATATGCATTGGTGCAGCTCGAGGGCTTCACTATCTTCACACAGGGTCTGCAAAACCAATCATTCATCGCGATGTGAAGTCTGCAAATATACTCTTAGACGAAAACCTCATGGCTGAAGTTGCTGATTTTGGTCTGTCAAAAGCTGGTCCTGATCTAGACAAAACCCATGTCACAACTGCTGTAAAAGGAAGTTTCGGTTACCTAGACCCAGAGTATCTAATCAGACAACAGTTGACTGAAAAATCAGATGTTTATTCCTTCGGTGTCGTACTGTTTGAGGTAATCTGTGGGAGGCCTGTAATTGATCCATCACTTCCTCGAGAGATGATAAATTTAGTTGAATGGGCAATGAAGGTTCAGAGAAAAGGAGAATTCGAGAGGATTATTGATCCCAATCTTGCTGATCAAATAAAGCCTGAGTCTCTGAGGAAGTATTTAGAGACAGCTGAGAAGTGCCTGGCCGAATGTGGGCTTGACCGCCCCACCATGGGTGAGGTGCTATTTAACTTGGAGCATGCCCTGCAACTTCAAGAAGAAGAAGAACACTCGTCAGAGATCAACGAGAACGAAGAAGTCTCATTGCAAGTTGATGATACACAACCTTTACAAACCATTGCTTCGACTAGACAGTATAGCATGGAAAGTGCAGAAGACATTGTTGATACTTCAATGAGTAAGGTTTTTTCACAGATGGCAAATGGAAGTTCAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144681.p1 GENE.R_Transcript_144681~~R_Transcript_144681.p1 ORF type:5prime_partial len:392 (+),score=76.81,Pkinase_Tyr|PF07714.13|1.1e-47,Pkinase|PF00069.21|3.7e-46 R_Transcript_144681:1-1176(+)
GVAVGALSVVVILAVIVFLVLRRNRAYLGGKSTVNGEFGYRFSFAAIREATDNFSENLVVGVGGFGKVYKGVLKDGRKVAIKRGNTESQQGINEFLTEIEMLSHFRHRHLVSLIGYCDDQNEMILLYEYMENGTLKSHLYGSNNPVLSWKQRLEICIGAARGLHYLHTGSAKPIIHRDVKSANILLDENLMAEVADFGLSKAGPDLDKTHVTTAVKGSFGYLDPEYLIRQQLTEKSDVYSFGVVLFEVICGRPVIDPSLPREMINLVEWAMKVQRKGEFERIIDPNLADQIKPESLRKYLETAEKCLAECGLDRPTMGEVLFNLEHALQLQEEEEHSSEINENEEVSLQVDDTQPLQTIASTRQYSMESAEDIVDTSMSKVFSQMANGSSR*

Click here to download the sequence:
Link to NCBI Protein BLAST