Transcript Information: R_Transcript_144696.p1


Annotated TAIR IDAT1G79590.1
Annotated Gene Namesyntaxin of plants 52
Annotated Gene Symbol(s)SYP52, ATSYP52
Annotation TypeOrtholog
Chromosome Positionchr1:29947064-29948304 | Forward length=233
E-Value6.2E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 195.38143001019
Replicate 264.507782555605
Replicate 381.294549596558
Condition 2: 8 Hour
Replicate 162.621297162955
Replicate 278.120357411121
Replicate 372.683683377805
Condition 3: 24 Hour
Replicate 164.086474644144
Replicate 251.243282358533
Replicate 358.4913980569


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144696.p1 GENE.R_Transcript_144696~~R_Transcript_144696.p1 ORF type:complete len:235 (+),score=48.43,SNARE|PF05739.15|9.9e-07 R_Transcript_144696:242-946(+)
ATGGCTTCCACATCTGGGGACTCTTGGATGAAGGAGTACAATGAAGCAGCGAAATTAGCTGATGATATTAATGCCATGATATCTGAGAAGACTTCAATGTCAGCTTCAGGACCAGAGACACAACGTCACTTCTCTTCTGTTCGGCGAAAGATTACGATTCTGGGGACTAGGCTGGATAGCCTGGAGTCCCTATTAGCTAAGCTTCCTAGCAAACAAACCATAACACAGAAAGAGTTGAATCGGCGCAAAGACATGCTTTCTAATTTGAGATCAAAGACAAACCAGATGGCAACCACTCTGAACATGTCAAATTTTGCCAACAGAGACAGCTTACTCGGCCCAGAGACAAAATCTGTTGATGCTGCCACTATGACTGCTGGTTTGGATAATCAAGGCATTGTCAATCTTCAACGACAAGTGATGAAAGATCAAGATGAGGGGCTTGAAAAGTTGGAGGATACTGTTATAAGTACAAAACATATTGCACTCACTGTGAATGAAGAACTTGACCTACATACAAGGCTCATTGATACCTTGGATCAGCATGTTGAAGTCACGGGCTCCCGGCTGCAGCGTATTCAGAGGAATCTCGCAATATTGAACAGGAAAACCAAGGGTGGATGCTCCTGTTTGTGCCTGCTGTTGGCAGTTGCTGGACTTATTGTTCTAGTTCTTGCCATCTTTGTGTTGATCAAGTATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144696.p1 GENE.R_Transcript_144696~~R_Transcript_144696.p1 ORF type:complete len:235 (+),score=48.43,SNARE|PF05739.15|9.9e-07 R_Transcript_144696:242-946(+)
MASTSGDSWMKEYNEAAKLADDINAMISEKTSMSASGPETQRHFSSVRRKITILGTRLDSLESLLAKLPSKQTITQKELNRRKDMLSNLRSKTNQMATTLNMSNFANRDSLLGPETKSVDAATMTAGLDNQGIVNLQRQVMKDQDEGLEKLEDTVISTKHIALTVNEELDLHTRLIDTLDQHVEVTGSRLQRIQRNLAILNRKTKGGCSCLCLLLAVAGLIVLVLAIFVLIKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST