Transcript Information: R_Transcript_144987.p1


Annotated TAIR IDAT1G08070.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)OTP82
Annotation TypeOrtholog
Chromosome Positionchr1:2514374-2516599 | Reverse length=741
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71781307125298
Replicate 20.4423377896692
Replicate 30.38606861117111
Condition 2: 8 Hour
Replicate 10.34390259757367
Replicate 20.43968026092219
Replicate 30.61185204338383
Condition 3: 24 Hour
Replicate 10.8383468931465
Replicate 20.55757676970561
Replicate 31.1681640141883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144987.p1 GENE.R_Transcript_144987~~R_Transcript_144987.p1 ORF type:5prime_partial len:712 (+),score=95.89,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|3.8e+02,PPR_2|PF13041.2|0.00089,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|8.4e-08,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|7.3e+03,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|0.85,PPR|PF01535.16|3.6,PPR|PF01535.16|3.2e-05,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|9.9e+02,PPR|PF01535.16|0.013,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|0.00087,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|1.8,PPR|PF01535.16|0.0018,PPR|PF01535.16|4.1e+03,DYW_deaminase|PF14432.2|9.2e+03,DYW_deaminase|PF14432.2|4.3e-38,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|6,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|8.1e-05,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.012 R_Transcript_144987:1-2136(+)
CTCCTCCAATCCCAACCTTCTATCTCTCTTCTCTTCAAATGCAAAACCCTTCAAACCCTCAAACAAATCCACTCTCAAATCATCAGAACGGGTCTTCACAACACCCAGTTTGCTCTAAGCAAGCTCATTGAATTTTGCGCCATTAACCCATCTGGTGATCTCCCTTATGCCCTTTCGATATTCGACTCAATCGATGAACCCAACACCCTGATTTGGAACGCTGTGATTCGAGGGCAATCGTTGAGTTCGAACCCATTCATGGCTTTGGAGTTCTATGTCCGTATGCTTGTTTCAGGGGCTGAGCCGAATTCCGATACTTTCCCATTCCTTTTGAAATCTTGCGCTAAATCGATAGCTTCCCGTGAGGGGGAACAGATTCATGGCCATATTTTGAAACTTGGGCTTGGCTCGGATGCGTTTATACACACTTCTTTGATCAATATGTATTCAAGTATTGGTGAGTTGGGGTATGCACGCCAAGTGTTCGATAAAAGTCCCCTTAGAGATGCTGTGTCATTCACGGCTTTGATTGCTGGGTATGTATCTAGCGGTCGTTTGGAGGATGCCCGTATGCTTTTTGATGAAATTCCTGTTAGGGATGTCGTCTCGTGGAATGCAATGATTGCTGGGTATGTTCAGAATGGTCAATTTAATGAGTCATTGGAATGTTTCCAAGAGATGTTGGGGGCTGGAGTTAGGCCTAACGAGAGTACATTGCTTAGCGTTCTCAAAGCTTGTGCTCAATCGGGTTCTCTTGAGCTAGGGAAGTGGGCTATGTCTTGGATTGAGGAAAATGGCCTTCGGGATAATACTCACCTTGTTAATGCACTGATTGACATGTATGCAAAGTGTGGTGATTTGGGAACAGCTTGGAGTTTGTTTGAGGGATTGCCTCAAAGGGACCTAATCTCTTGGAATGTGATGATTGGCGGCTACACACACAGATCTCATTACAAAGAAGCTTTGTGTTTGTTTAGAGATATGCAAGAACAACATGTACAACCAAATGATGTGACCTTCCTAGCTGTTCTCCCTGCTTGTGCTCATCTAGGGGCCCTTGATTATGGCAAATGGATTCATGCCTATGTTGCAAGAAATTTCAACCATTTAACAAATACACAACTTTGGACAAGCCTAATTGACATGTATGCCAAATGTGGCGACATAGAGGTCGCTAAACAGGTCTTTGACAGTGTCGAAACCAAAACTTTGTCTTCTTGGAATGCACTGATTTCCGGGCTAGCTATGCATGGAGGTGCACTGCATGCCCTCGACCTTTTCTCTAGGATGATAACTGAAGGATTTAGACCTGACGATATCACATTTGTGGGTGTCTTGACAGCTTGTAGCCATGCTGGTTTGGTAGATCTTGGTCGCGAATATTTCAATTCAATGATCCACGATTATGAAATTTCACCGAAACTACATCACTATGGATGCATGATCGATCTCCTTGGCCAAGCTGGACTGTTTGAAGAAGCAATGGCCCTAGTAGATACAATGGAAATGGACCCAGATGGTGCAATATGGGGTTCTCTGCTCGCAGCCTGTAAGCTCCATAAGAAGCCTGTGGAAATGGCAGAACAAATCGCAAACCATCTTTTTGAGCTGGAACCTAATAGCCCTGGTGCTTATGTGCTTTTGTCAAATATCTATGCAGGGGCCAATAGATGGGATGATGTAGCTAGAATTAGAACGCGATTGAATGATCGAGGGATGAAGAAAGTTCCTGGATGTACTTCCATTGAGGTGAATAGCATAGTACATGAGTTTCTTGTAGGGGATAAGTTGCACCCGCAAAGCAAAGAAATATATGAGATGTTGGATGAAGTAGATAGGCTTCTAGACATACATGGACATGTCACTGATACTTCTGAGGTTCTTTATGACATGGATGAAGATTGGAAAGAAGGTGCATTAAGCCATCATAGCGAGAGATTAGCTATTGCTTATGGATTGATTAGTACTAAACCAGGCACAACAATTAGGATTGTCAAAAACTTGCGCGTATGTGGAAATTGCCACTCTGCTACCAAACTGATTTCGAAGATCTTCAACAGGGAGATTATTGCTAGAGATCGCAATCGCTTCCACCATTTCAAAGACGGCTCATGTTCATGTATGGATTACTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144987.p1 GENE.R_Transcript_144987~~R_Transcript_144987.p1 ORF type:5prime_partial len:712 (+),score=95.89,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|3.8e+02,PPR_2|PF13041.2|0.00089,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|8.4e-08,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|7.3e+03,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|0.85,PPR|PF01535.16|3.6,PPR|PF01535.16|3.2e-05,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|9.9e+02,PPR|PF01535.16|0.013,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|0.00087,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|1.8,PPR|PF01535.16|0.0018,PPR|PF01535.16|4.1e+03,DYW_deaminase|PF14432.2|9.2e+03,DYW_deaminase|PF14432.2|4.3e-38,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|5.3e+03,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|6,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|8.1e-05,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.012 R_Transcript_144987:1-2136(+)
LLQSQPSISLLFKCKTLQTLKQIHSQIIRTGLHNTQFALSKLIEFCAINPSGDLPYALSIFDSIDEPNTLIWNAVIRGQSLSSNPFMALEFYVRMLVSGAEPNSDTFPFLLKSCAKSIASREGEQIHGHILKLGLGSDAFIHTSLINMYSSIGELGYARQVFDKSPLRDAVSFTALIAGYVSSGRLEDARMLFDEIPVRDVVSWNAMIAGYVQNGQFNESLECFQEMLGAGVRPNESTLLSVLKACAQSGSLELGKWAMSWIEENGLRDNTHLVNALIDMYAKCGDLGTAWSLFEGLPQRDLISWNVMIGGYTHRSHYKEALCLFRDMQEQHVQPNDVTFLAVLPACAHLGALDYGKWIHAYVARNFNHLTNTQLWTSLIDMYAKCGDIEVAKQVFDSVETKTLSSWNALISGLAMHGGALHALDLFSRMITEGFRPDDITFVGVLTACSHAGLVDLGREYFNSMIHDYEISPKLHHYGCMIDLLGQAGLFEEAMALVDTMEMDPDGAIWGSLLAACKLHKKPVEMAEQIANHLFELEPNSPGAYVLLSNIYAGANRWDDVARIRTRLNDRGMKKVPGCTSIEVNSIVHEFLVGDKLHPQSKEIYEMLDEVDRLLDIHGHVTDTSEVLYDMDEDWKEGALSHHSERLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST