Transcript Information: R_Transcript_144992.p1


Annotated TAIR IDAT4G33170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15995701-15998673 | Reverse length=990
E-Value7E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5937511212522
Replicate 21.0377084225518
Replicate 31.1698663352236
Condition 2: 8 Hour
Replicate 10.72610472660694
Replicate 20.66309040056234
Replicate 30.8672103920778
Condition 3: 24 Hour
Replicate 11.7019791190225
Replicate 21.4170594674341
Replicate 31.6226469701983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_144992.p1 GENE.R_Transcript_144992~~R_Transcript_144992.p1 ORF type:complete len:607 (+),score=70.60,PPR|PF01535.16|48,PPR|PF01535.16|0.07,PPR|PF01535.16|72,PPR|PF01535.16|2.6,PPR|PF01535.16|8,PPR|PF01535.16|0.52,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|4.4e-06,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.081,PPR|PF01535.16|5.4e+03,PPR|PF01535.16|1.2e+02,PPR_2|PF13041.2|2.8e+02,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|17,PPR_2|PF13041.2|6.4e-07,PPR_2|PF13041.2|8.3,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|4.5e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|16,PPR_2|PF13041.2|3e+03,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|4.8e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|6.6e+02,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|45,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|2.1e+03,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|17,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.083,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|6.4e-06,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.42 R_Transcript_144992:90-1910(+)
ATGTTCTCTGCAAAATCATTTTACTTCCAAGCAAGGAGGGCCCAACACCTTTTCTCATACTCACCATTGATCTTCTTCACAACCACCTCAAAGCGCACCAACAAACTCACCTTCGAAATACCAGACACACAAAAAGCCTACTCCTACTTTCTCAAAAATGCCCAGAAAACCTCTGATTTGCCTTATGGGCAAGCAGCCCATACCCAGCTCATTAAAAACAATTGCATATCTTTCCCTTTCCTCCAGAATTTCCTCCTTACTACGTACCTTAAATGTGGGGACTTTTTTTTGAACTTAAATGTGGACTTATATAGTGCACTCCTTCTGTTCGATGAAATGCCTGAAAGAAATGTTGTTTCTTGGTCTTCCCTTATTGCTGGCGTTGTCCGACTTGGCTATCCTCAACATGGTCTCCGGTACTTCTACCGTATGTACGGTGTTGATATCAGGCCTATGGAATATACGCTAGTTAGTGCATTCAATGCTTGCTCCGTCTCTGGTACTTCGGCTCCTCAAGCATATCAACTTTATGCATTAGTTGTTCAATTGGGATTTGAATGGAATGTTACAGTTATCAATGCATTTCTGACGACTTTAATAAGGAATGGATGTTTTAGGGATGCTGTAAGGGCTTTTGACGAGTGCACGGTTAAAGATACAGTGTCTTGGAATGCAATGATTGCTGGGTATTCGCACATTTCACCATTCGAAATCCCACGTTTCTGGTTGAGGATGATCTGTGAAGGTGTAAAACCAGATGGGTTTACATTTTCCACTGTTCTAAATGGCTTGGCTAATCTTGGGGACCGTAAATTGGGAATGCAGGTCCATGGGCAGCTCGTGAAGAGTGGCCATGGGAGTGAAACGTGTGTTGCGAATTCAGTACTTGATATGTATGTGAAGTTTGGGGATTCAGTTGAGGGGTTTAAAGCTTTTGATGAGATCAGTTACAAGAATGTTGTATCTTGGACAACAATGGCAACCGGATGTGTGCATTGGAGGTTGCCTAACAAAGCAATTGAACTTTTTGGAGAAATGAAGATGAAGGGGATCAGACCAAATAAATTTAGTCTAGCTACCAACTTTAATGCCTGCGCTAATATGGCTAATCTGGATGAAGGGAAGAAAGCTCATGCTTTGAGGATAAAGCTCAAGTCGAGTGAAGTTGATGTATGTATCGACAATGCTCTACTTGATATGTATGCCAAATGTGGATGTATGGAGGATGCAATGAAGGTGTTTAGGAGAATGAAGGAGCACACAATTGTGACATGGACAACTATGGTGATGGGATTTGCTCAAAGCGGCCAAGTAACAAATGCTCTTGAAATTTTTGATGAAATGGTAGCTCAAGGCACTAATAAGCCCAACTATGTAACTTTCGTGTGTGTGCTTTACGCTTGTAGCCAAGGAGGGTTTGTCGAGGAGGGCTGGAAGCATTTCTCCTCAATGACTCAACAGTATGGAATTTCACCAGGAGAAGATCACTATGTTTGTATGGTCGATCTCCTTGGACGAACTGGACGCATAAAGGAAGCAGAGGAACTCATCTCAACAATGCCATTCAAACCAGGGCCGCTAATTTGGCAGACCTTACTTGGCGCCTGTCACATTCATGGGGATATTGAAGCAGGAAAGCGAGCAGCGGAGAAGGCAATGCATCTTAGTCGGAGTTACCCGTCCACTTACGTACTCTTATCCAACATGTTTGCTGGTTTGAGTCAGTGGGAAGGTGCAGAGACCATGAGAGATCTGATGCAAACACGAAATGTAAACAAAAAGCCTGGGCTAAGTTCACTAACACTTATGGATATTCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_144992.p1 GENE.R_Transcript_144992~~R_Transcript_144992.p1 ORF type:complete len:607 (+),score=70.60,PPR|PF01535.16|48,PPR|PF01535.16|0.07,PPR|PF01535.16|72,PPR|PF01535.16|2.6,PPR|PF01535.16|8,PPR|PF01535.16|0.52,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|4.4e-06,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.081,PPR|PF01535.16|5.4e+03,PPR|PF01535.16|1.2e+02,PPR_2|PF13041.2|2.8e+02,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|17,PPR_2|PF13041.2|6.4e-07,PPR_2|PF13041.2|8.3,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|4.5e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|16,PPR_2|PF13041.2|3e+03,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|4.8e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|6.6e+02,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|45,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|2.1e+03,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|17,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.083,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|6.4e-06,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.42 R_Transcript_144992:90-1910(+)
MFSAKSFYFQARRAQHLFSYSPLIFFTTTSKRTNKLTFEIPDTQKAYSYFLKNAQKTSDLPYGQAAHTQLIKNNCISFPFLQNFLLTTYLKCGDFFLNLNVDLYSALLLFDEMPERNVVSWSSLIAGVVRLGYPQHGLRYFYRMYGVDIRPMEYTLVSAFNACSVSGTSAPQAYQLYALVVQLGFEWNVTVINAFLTTLIRNGCFRDAVRAFDECTVKDTVSWNAMIAGYSHISPFEIPRFWLRMICEGVKPDGFTFSTVLNGLANLGDRKLGMQVHGQLVKSGHGSETCVANSVLDMYVKFGDSVEGFKAFDEISYKNVVSWTTMATGCVHWRLPNKAIELFGEMKMKGIRPNKFSLATNFNACANMANLDEGKKAHALRIKLKSSEVDVCIDNALLDMYAKCGCMEDAMKVFRRMKEHTIVTWTTMVMGFAQSGQVTNALEIFDEMVAQGTNKPNYVTFVCVLYACSQGGFVEEGWKHFSSMTQQYGISPGEDHYVCMVDLLGRTGRIKEAEELISTMPFKPGPLIWQTLLGACHIHGDIEAGKRAAEKAMHLSRSYPSTYVLLSNMFAGLSQWEGAETMRDLMQTRNVNKKPGLSSLTLMDIP*

Click here to download the sequence:
Link to NCBI Protein BLAST