Transcript Information: R_Transcript_14503.p1


Annotated TAIR IDAT5G59710.1
Annotated Gene NameVIRE2 interacting protein 2
Annotated Gene Symbol(s)VIP2, AtVIP2
Annotation TypeOrtholog
Chromosome Positionchr5:24058157-24061736 | Forward length=614
E-Value4.6E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8236052973431
Replicate 23.278701566509
Replicate 32.6139820680294
Condition 2: 8 Hour
Replicate 14.1912741801591
Replicate 22.9545909940305
Replicate 35.8324995086529
Condition 3: 24 Hour
Replicate 15.3775043956784
Replicate 22.5830483385361
Replicate 35.1268497464804


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14503.p1 GENE.R_Transcript_14503~~R_Transcript_14503.p1 ORF type:3prime_partial len:333 (+),score=72.74 R_Transcript_14503:505-1500(+)
ATGCATGGTGGATTTAATGTTCCAAATATGTCGGGTACACTTACTTCCAGAAATTCATCTATGAATAGTGTTGCCTCTGTTGGGGTTCAACAACCCACTGGAAATGTTCCAGGGGGGCGTTTTACATCAAATAATATTCCCGTTGCTCTGTCTCAGATATCTCATGGAAGCTCACATGGTGGATATTCAGGAGTTACAAATAGAGGAGGTATGAATGTTGTAGGAAGCCCTGGGTATAATAGTAACACAAATGGTGTTGGTGGTTCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAATCATAGTGCTGTTCCAGGCCTAGGTGTCTCCCCTGTTTTGGGAAATGCAGGTCCTCGAGTTTCAGGTTCGATGGGAAGTATGGTTGGCAGTGGAAGCATTGGGAGGAATATGAGCTCTGGTGGAGGTCTCTCTGTGCCTGGTCTTGCTTCTCGTCTGAATATGTCCACAAACAGCGGATCTGGGAGCTTAGGAGTGCAGGGACCTAACAGATTAACAAGTGGCGTACTTCAACAAGCTTCACCGCAGGTACTTAACATGTTTGGAAACTCCTACCCTTCTGCTGGGGGGCCACTCTCGCAGAGCCATGTCCAAGCAGTAAATAATTTAAGTTCCATGGGGATGTTAAGTGATGATAACTCCAATGACAGTTCCCCTTTTACGCTAAATGACTTTCCTCAGCTCGGCGGTCGACCTAATTCTGCTGGGGGTCCTCAAGGACAATTAGGTTCATTGAGAAAAGGCCTTGGAGTCAGTCCTATTGTTCAGCAAAACCAGGAATTCAGCATCCAAAATGAGGATTTTCCTGCCTTGCCAGGTTTCAAAGGTGGAAGTGCTGATTATGGAATGGACTTCCAGCAAAAGGAACAGATTCATGATAATGGAGTACCTATGGGCCAATCTCAACACTTCTCTATGGGGAGGTCGCCGGGATTTAACTTGGGAGGAATGTACTCATCTCATCGTCCACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14503.p1 GENE.R_Transcript_14503~~R_Transcript_14503.p1 ORF type:3prime_partial len:333 (+),score=72.74 R_Transcript_14503:505-1500(+)
MHGGFNVPNMSGTLTSRNSSMNSVASVGVQQPTGNVPGGRFTSNNIPVALSQISHGSSHGGYSGVTNRGGMNVVGSPGYNSNTNGVGGSIPGILPTSAAIGNHSAVPGLGVSPVLGNAGPRVSGSMGSMVGSGSIGRNMSSGGGLSVPGLASRLNMSTNSGSGSLGVQGPNRLTSGVLQQASPQVLNMFGNSYPSAGGPLSQSHVQAVNNLSSMGMLSDDNSNDSSPFTLNDFPQLGGRPNSAGGPQGQLGSLRKGLGVSPIVQQNQEFSIQNEDFPALPGFKGGSADYGMDFQQKEQIHDNGVPMGQSQHFSMGRSPGFNLGGMYSSHRPQ

Click here to download the sequence:
Link to NCBI Protein BLAST