Transcript Information: R_Transcript_145032.p1


Annotated TAIR IDAT1G63490.1
Annotated Gene Nametranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23544938-23551946 | Reverse length=1116
E-Value7.2E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.533329100477
Replicate 21.2328788500673
Replicate 31.5488541435121
Condition 2: 8 Hour
Replicate 11.8299044978368
Replicate 21.631309885211
Replicate 33.0037362770391
Condition 3: 24 Hour
Replicate 12.736962783374
Replicate 21.1380827541401
Replicate 32.3757117186846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145032.p1 GENE.R_Transcript_145032~~R_Transcript_145032.p1 ORF type:3prime_partial len:562 (+),score=105.37,JmjC|PF02373.18|1e+04,JmjC|PF02373.18|2.1e-42,JmjN|PF02375.13|4.6e-15,ARID|PF01388.17|1.2e-11,PHD|PF00628.25|1.2e-09 R_Transcript_145032:267-1949(+)
ATGATGGGGAAAGGTAGACCTAGGGCAGTTGAAAGAGGGGGAGGGTTAGGGCAAACTTCAAATTTATTATCAAATGGTTCTTTAAATATACCACCAGCACCTGTTTATTATCCATCTGATGAAGAATTTAAGGATCCTTTGGAGTTTATTTACAAGATTAGGGAAGAAGCTGAGCCTTATGGGATTTGTAAGATTGTACCGCCTAAGAGTTGGAAAGCACCTTTTGCTTTGGATTTGAATAGATTTAGTTTCCCTACCAAGACTCAGGCAATTCATCAGTTGCAAGCTAGGCCCGCGTCGTGCGACTCGAAGACGTTCGAGTTGGAGTACAAGAGTTTTTTGGAGGGGCATTGCGGGCGGAAATCGAGGAGGAAGGTTATTTTCGAGGGGGAGGAGTTGGATTTGTGTAAGTTGTTTAATGCGGCGAAGCGGTTTGGGGGGTATGATAAGGTCACCAAGGAGAAGAAATGGGGTGAGGTTTTTAGGTTTGTTAGGCCAGGGAGTAAAATTTCAGAATGCGCTAAGCATGTTTTGAGTCAATTGTATAGCGAACATTTGTATGATTATGAGGAGTATTATCATAAGTTGAATAAGGGGAAATATAAGGGTTGTAGGAGAGGGATACGGAATGAGAGGAAGAGTGATCAGAAGTTGGATTTTTGCAGCTCTAAGAAGAGGCTGAAGAATAATAGTGGGGAGGCTGTTAAAGTTTCCGTTCCTGAGAAGGAAGAGGAGCGCGATCAGATATGTGAACAATGTCATAGTGGGTTGCATGGTGAAGTTATGTTGTTGTGTGATAGATGTAATAAAGGATGGCATATATATTGCCTGTCACCACCTTTGGATGCTGTCCCTCCAGGAAATTGGTACTGTCTTGAGTGCCTGAATTCTGATAAAGATTGCTTTGGGTTTGTCCCTGGGAAATGCTTTTCTTTGGAAGCTTTTAGAAAGATGGCTGATCGGACCAAGAAGAAATGGTTTGGCTCTGCATCTTGCTCCCGTGTCCAGCTAGAAAAGAAATTTTGGGAAATCGTGGAAGGATCGTTGGGGGAAGTTGAAGTCATGTACGGTAGTGATTTGGATACGTCTGTGTATGGAAGTGGTTTTCCTCGCCCAAATGACCAAAGACTGGAGTCCATTGATGCTGAATTGTGGAATGAATATTGTAACAGTCCCTGGAATCTGAATAACTTGCCGAAGTTGAGGGGCTCAATGCTTCGAGCAGTTCATCACAGTATTGCTGGTGTTATGGTGCCCTGGTTATATATAGGCATGCTCTTCTCTGCTTTCTGTTGGCATTTTGAAGATCATTGCTTCTATTCAATGAATTACCATCACTGGGGAGAGCCAAAATGTTGGTATAGTGTTCCAGGCAGTGAAGCCTCAGCATTTGAGAAGGTCATGCGCAGCTGCCTTCCTGATCTCTTTGATGCCCAACCAGACTTGCTCTTCCAGCTTGTTACAATGTTGAATCCCTCTGTTCTACAGGAAAACGGTGTTCCAGTTTACACTGTTCTGCAGGAGCCGGGAAATTTCGTGATTACTTTTCCTAGATCATATCATGGAGGTTTCAACTTTGGGTTGAACTGTGCTGAAGCTGTTAATTTTGCTCCTGCTGATTGGTTACCTCATGGAGGGTTTGGATCGGAGCTCTATCAACTGTATCATAAGCCTGCTGTGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145032.p1 GENE.R_Transcript_145032~~R_Transcript_145032.p1 ORF type:3prime_partial len:562 (+),score=105.37,JmjC|PF02373.18|1e+04,JmjC|PF02373.18|2.1e-42,JmjN|PF02375.13|4.6e-15,ARID|PF01388.17|1.2e-11,PHD|PF00628.25|1.2e-09 R_Transcript_145032:267-1949(+)
MMGKGRPRAVERGGGLGQTSNLLSNGSLNIPPAPVYYPSDEEFKDPLEFIYKIREEAEPYGICKIVPPKSWKAPFALDLNRFSFPTKTQAIHQLQARPASCDSKTFELEYKSFLEGHCGRKSRRKVIFEGEELDLCKLFNAAKRFGGYDKVTKEKKWGEVFRFVRPGSKISECAKHVLSQLYSEHLYDYEEYYHKLNKGKYKGCRRGIRNERKSDQKLDFCSSKKRLKNNSGEAVKVSVPEKEEERDQICEQCHSGLHGEVMLLCDRCNKGWHIYCLSPPLDAVPPGNWYCLECLNSDKDCFGFVPGKCFSLEAFRKMADRTKKKWFGSASCSRVQLEKKFWEIVEGSLGEVEVMYGSDLDTSVYGSGFPRPNDQRLESIDAELWNEYCNSPWNLNNLPKLRGSMLRAVHHSIAGVMVPWLYIGMLFSAFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEASAFEKVMRSCLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYTVLQEPGNFVITFPRSYHGGFNFGLNCAEAVNFAPADWLPHGGFGSELYQLYHKPAVL

Click here to download the sequence:
Link to NCBI Protein BLAST