Transcript Information: R_Transcript_145277.p1


Annotated TAIR IDAT1G28040.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9773580-9774910 | Reverse length=299
E-Value6.5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2122217587812
Replicate 23.2302000640459
Replicate 33.3283293943128
Condition 2: 8 Hour
Replicate 11.9881685213575
Replicate 22.9623390473365
Replicate 32.4822715378307
Condition 3: 24 Hour
Replicate 12.3546468951491
Replicate 23.5816232386408
Replicate 31.8707439903331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145277.p1 GENE.R_Transcript_145277~~R_Transcript_145277.p1 ORF type:complete len:234 (+),score=5.79,zf-RING_2|PF13639.2|1.4e+03,zf-RING_2|PF13639.2|6.9e-13,zf-RING_11|PF17123.1|8.6e+03,zf-RING_11|PF17123.1|2e-08,zf-rbx1|PF12678.3|7e+03,zf-rbx1|PF12678.3|3.5e-08 R_Transcript_145277:47-748(+)
ATGTGTGATAAGGCATGTTGTACAAATACTACCCGCCATGCCATCATCTTGCTCTCCATTCTTTCTCTTCTCCTCTTGATTAACGCTCCAAGTCTCCACCTCCGGCCGCCTTCGACCACCTCGAAAGAGGTGGCCGGACCTAACGGCGGTGGTGGCGGTGGCGATGCTCCCCCTTGCCTTCCTTGTGCCACGTGTACCCACAACATGTTCACGTCTTTTCTTTATGGTGTCTTATTCACCTCCATTTTTGTCATGACCATCATCGCGACCAACCACATACCAACACATACCAGCACTCATCATACTGCTCCGCCCCAACCCTGGGGCGGACCAGCTACTTGGTCCGTCCTCATGGGTACCACCGAAGCGGATTCCTTAGGCACCCGAGATGACGGCAGTAGCGGTAGTTCCAGTGGCGGTGGCAGCGGCGTTGGGGACGATCTTATGAGAACGTTCCCAACGTTTGCGTATTCGTCAAGGTGGAAGTCAAAGATGGGGAAAGGAGAGTCAAAGTGCGTGATATGTCAAACCAAGTTTAGAGAAGGAGAGATGTTGAGATGGTTACCTGAATGTGATCATGTGTTTCATTTATCTTGCATTGATAAATGGTTAGCTTCTCATGAATCTTGCCCATGTTGTCGTGCTCAGCTTCAAATACTGTCAAATGATATTTACGATGAGGATTTCGAGTTCCCTTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145277.p1 GENE.R_Transcript_145277~~R_Transcript_145277.p1 ORF type:complete len:234 (+),score=5.79,zf-RING_2|PF13639.2|1.4e+03,zf-RING_2|PF13639.2|6.9e-13,zf-RING_11|PF17123.1|8.6e+03,zf-RING_11|PF17123.1|2e-08,zf-rbx1|PF12678.3|7e+03,zf-rbx1|PF12678.3|3.5e-08 R_Transcript_145277:47-748(+)
MCDKACCTNTTRHAIILLSILSLLLLINAPSLHLRPPSTTSKEVAGPNGGGGGGDAPPCLPCATCTHNMFTSFLYGVLFTSIFVMTIIATNHIPTHTSTHHTAPPQPWGGPATWSVLMGTTEADSLGTRDDGSSGSSSGGGSGVGDDLMRTFPTFAYSSRWKSKMGKGESKCVICQTKFREGEMLRWLPECDHVFHLSCIDKWLASHESCPCCRAQLQILSNDIYDEDFEFPF*

Click here to download the sequence:
Link to NCBI Protein BLAST