Transcript Information: R_Transcript_145280.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.353710888232
Replicate 25.2868382343197
Replicate 35.6030868940229
Condition 2: 8 Hour
Replicate 14.0516179409111
Replicate 24.5043502989439
Replicate 35.4846593241457
Condition 3: 24 Hour
Replicate 13.7987738578215
Replicate 27.1401917271653
Replicate 37.2434130618509


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145280.p1 GENE.R_Transcript_145280~~R_Transcript_145280.p1 ORF type:complete len:139 (+),score=19.85 R_Transcript_145280:1142-1558(+)
ATGCCATTGAGACTAACTGTTGTTACTAAAACAGGAACAATTTTTGTAACATTTCACCACTTAAACACCAACATGCCTAAGGAGTGGAAACCTTTTGTTGATGGGGCATTGAACGAAAGACCACCATTATTCACTGGTTGTAGATCTGAATTTGCTTCTTGGAAAGGTTGGATGAGATTTTACATCCAAAATGTTGATTATGACCTTTGGGATGTTATCATGGACGGACCATATGTCCCTAACAAGCCAGAGAGTGAATATACTCAAGATGATTTCAACAAACTGCAGAAAAATGCTAGAGCTTTTTACATTCTTAATTGCAGTTTAGATGTGAATTGCTATAACCTTACTGCTAGCTGCACTTCAGCAAAACAAGTGTGGGATGCCCTTGTAACCATGTTTGAGCACGAATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145280.p1 GENE.R_Transcript_145280~~R_Transcript_145280.p1 ORF type:complete len:139 (+),score=19.85 R_Transcript_145280:1142-1558(+)
MPLRLTVVTKTGTIFVTFHHLNTNMPKEWKPFVDGALNERPPLFTGCRSEFASWKGWMRFYIQNVDYDLWDVIMDGPYVPNKPESEYTQDDFNKLQKNARAFYILNCSLDVNCYNLTASCTSAKQVWDALVTMFEHEY*

Click here to download the sequence:
Link to NCBI Protein BLAST