Transcript Information: R_Transcript_145281.p1


Annotated TAIR IDAT1G28040.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9773580-9774910 | Reverse length=299
E-Value9.6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.679923962867
Replicate 210.498150208149
Replicate 39.7475479132564
Condition 2: 8 Hour
Replicate 18.8565894490036
Replicate 26.422806486298
Replicate 34.0551470534907
Condition 3: 24 Hour
Replicate 17.5711917453067
Replicate 29.1505861354523
Replicate 35.1226542884228


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145281.p1 GENE.R_Transcript_145281~~R_Transcript_145281.p1 ORF type:5prime_partial len:94 (-),score=8.65,zf-RING_2|PF13639.2|1.1e-13,zf-rbx1|PF12678.3|4.4e-09,zf-RING_11|PF17123.1|4.3e-09,zf-C3HC4_2|PF13923.2|7.4e-06,zf-C3HC4_3|PF13920.2|8.4e-06 R_Transcript_145281:74-355(-)
AGCGGCGGTGTTGGGGACGCCCTTATGAGGACGTTCCCAACGTTTGCGTATTCGTCAAGGTGGAAGTCAAAGATGGGGAAAGGAGAGTCAAAGTGCGTGATATGTCAAACCAAGTTTAGAGAAGGAGAGATGTTGAGATGGTTACCTGAATGTGATCATGTGTTTCATTTATCTTGCATTGATAAATGGTTAGCTTCTCATGAATCTTGCCCATGTTGTCGTGCTCAGCTTCAAATACTATCAAATGAGATTTATGAAGAGGATTTCGAGTTCCCTTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145281.p1 GENE.R_Transcript_145281~~R_Transcript_145281.p1 ORF type:5prime_partial len:94 (-),score=8.65,zf-RING_2|PF13639.2|1.1e-13,zf-rbx1|PF12678.3|4.4e-09,zf-RING_11|PF17123.1|4.3e-09,zf-C3HC4_2|PF13923.2|7.4e-06,zf-C3HC4_3|PF13920.2|8.4e-06 R_Transcript_145281:74-355(-)
SGGVGDALMRTFPTFAYSSRWKSKMGKGESKCVICQTKFREGEMLRWLPECDHVFHLSCIDKWLASHESCPCCRAQLQILSNEIYEEDFEFPF*

Click here to download the sequence:
Link to NCBI Protein BLAST