Transcript Information: R_Transcript_145565.p1


Annotated TAIR IDAT4G39620.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2453, ATPPR5
Annotation TypeOrtholog
Chromosome Positionchr4:18395294-18397578 | Forward length=563
E-Value5.4E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0037269771434
Replicate 20.76972180752213
Replicate 31.5862099353751
Condition 2: 8 Hour
Replicate 11.2467344677823
Replicate 20.45541510878178
Replicate 31.8484328533999
Condition 3: 24 Hour
Replicate 12.1040760188323
Replicate 21.1229765219235
Replicate 31.1590230587766


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145565.p1 GENE.R_Transcript_145565~~R_Transcript_145565.p1 ORF type:complete len:491 (+),score=74.97,PPR_2|PF13041.2|8e+02,PPR_2|PF13041.2|40,PPR_2|PF13041.2|8.1e-09,PPR_2|PF13041.2|4.2e-12,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|8.1e-13,PPR_2|PF13041.2|5.7e-07,PPR_2|PF13041.2|7.8e-06,PPR_2|PF13041.2|99,PPR_2|PF13041.2|3.3e-05,PPR_2|PF13041.2|38,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|19,PPR|PF01535.16|0.00024,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.002,PPR|PF01535.16|0.00047,PPR|PF01535.16|2.9,PPR|PF01535.16|0.0024,PPR|PF01535.16|1.5e+02,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.00053,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|15,PPR_3|PF13812.2|8.8e+02,PPR_3|PF13812.2|0.0077,PPR_1|PF12854.3|4,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|4.5e-06,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|2.8,Clathrin|PF00637.16|14,Clathrin|PF00637.16|0.56,Clathrin|PF00637.16|14 R_Transcript_145565:178-1650(+)
ATGTCACAAAATGTAGCACTAAACCCTCATCTCCAACAACCAACGAAGTTAAACTGTATAACCCACCTCACCTTTTCTCAAATTACTTCCTACCCACCATTTTTAAACCATAAATCTTTGAAAAGCTTCAATCTTTCCACTAAAATCACCTGCCTTTCATCCAGACCCAACAGAAGATCCTTTCCTAAGAATGAAACTTCAGAGGCTAAGGAGATTGTTAGGACAGTTTTGAGGAATGTCACTGATAAAAAGCCTTTGGTTTCTACATTGAACAAGTATGTTCAAGTTGTTAGGATGGAGCATTGTTTTATGCTTTTTGAAGAGCTTGGTAAAGGTGATAAGTGGCTTCAATGCCTTGAGGTTTTTAGATGGATGCAGAAACAAAGATGGTATATTGCAGATAATGGTGTATACTCCAAATTGATATCTGTTATGGGGAAAAAGGGACAAACTCGGATGGCAATGTGGCTATTCTCAGAGATGCGCAATAGCGGTTGTCGGCCTGACACTTCTGTTTACAATGCGCTCATAACAGCACACTTACATTCTCGTGATAAATCTAAGGCATTGGACAAAGCACTTGCATCTTTTAATAAGATGAAGGGAATGGAGCGTTGCAAGCCTAATATCGTAACATACAACATTCTGTTAAGAGCTTTTGCTCAAGCACGAAATGTTAATCAAGTTGAGGCTTTGTTCAAAGAGCTTGAAGAGAGCGTAGTTTCTCCTGATGTTTTCACGTTCAATGGTGTGATGGATGCGTATGGAAAAAATGGGATGATAAGAGAAATGGAGTCTGTGTTGTCTCGCATGAAAAGCAATCAGTGTAAGCCTGACGTGATCACTTTCAATTTGTTGATTGATTCCTATGGTAAGAGACAAGAATTTGAGAAGATGGAGCAAGTTTTTAAGAGCTTGTTACGCTCCAAGGAGAAGCCGACACTTCCCACATTTAATTCAATGATCATCAATTACGGAAAGGCACGGCTTAGGGAGAAAGCAGAAACTGTTTTCCAGAAAATGACCACAATGGGGTACACTCCCAACTATATTACATATGAGAGTGTTATTATGATGTATGGAATATGTGATTACATTTCTAGGGCAAGGGAAATGTTTGACAGTATAGTCGCATCCAAAAAGGGGGTGAAGGTGTCAACGTTGAATGCTATGTTGGATGTTTATTGTATGAATAACCTACCAATGGAAGCACATATGCTCTTGGATAGTGCTCGGGAGTTGGGCATTCGCACAGATTCTTCTACTTATAAGCTTCTTTATAAGGCCTACACGAAGGCAAATATGAAAGAGCTTTTGCAGAAGTTGTTAAAGTATATGGATCAAGATGGTATTGTACCTAACAAGAGATTTTTCCTGGATGCTTTGGGAGCGTTTGGTTCTTCATCAACTGAGAAGGCTTCAGATAGTGTGACTATGAACAAGAGCAGCCCACAAATTGCCACAAAGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145565.p1 GENE.R_Transcript_145565~~R_Transcript_145565.p1 ORF type:complete len:491 (+),score=74.97,PPR_2|PF13041.2|8e+02,PPR_2|PF13041.2|40,PPR_2|PF13041.2|8.1e-09,PPR_2|PF13041.2|4.2e-12,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|8.1e-13,PPR_2|PF13041.2|5.7e-07,PPR_2|PF13041.2|7.8e-06,PPR_2|PF13041.2|99,PPR_2|PF13041.2|3.3e-05,PPR_2|PF13041.2|38,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|19,PPR|PF01535.16|0.00024,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.002,PPR|PF01535.16|0.00047,PPR|PF01535.16|2.9,PPR|PF01535.16|0.0024,PPR|PF01535.16|1.5e+02,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.00053,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|15,PPR_3|PF13812.2|8.8e+02,PPR_3|PF13812.2|0.0077,PPR_1|PF12854.3|4,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|4.5e-06,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|2.8,Clathrin|PF00637.16|14,Clathrin|PF00637.16|0.56,Clathrin|PF00637.16|14 R_Transcript_145565:178-1650(+)
MSQNVALNPHLQQPTKLNCITHLTFSQITSYPPFLNHKSLKSFNLSTKITCLSSRPNRRSFPKNETSEAKEIVRTVLRNVTDKKPLVSTLNKYVQVVRMEHCFMLFEELGKGDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALDKALASFNKMKGMERCKPNIVTYNILLRAFAQARNVNQVEALFKELEESVVSPDVFTFNGVMDAYGKNGMIREMESVLSRMKSNQCKPDVITFNLLIDSYGKRQEFEKMEQVFKSLLRSKEKPTLPTFNSMIINYGKARLREKAETVFQKMTTMGYTPNYITYESVIMMYGICDYISRAREMFDSIVASKKGVKVSTLNAMLDVYCMNNLPMEAHMLLDSARELGIRTDSSTYKLLYKAYTKANMKELLQKLLKYMDQDGIVPNKRFFLDALGAFGSSSTEKASDSVTMNKSSPQIATKT*

Click here to download the sequence:
Link to NCBI Protein BLAST