Transcript Information: R_Transcript_145566.p1


Annotated TAIR IDAT4G39620.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2453, ATPPR5
Annotation TypeOrtholog
Chromosome Positionchr4:18395294-18397578 | Forward length=563
E-Value2.6E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6856296396178
Replicate 20.38779446679178
Replicate 30.30219970443473
Condition 2: 8 Hour
Replicate 10.64606503818589
Replicate 20.70799625882382
Replicate 30.57472118059273
Condition 3: 24 Hour
Replicate 10.36344813553094
Replicate 20.29096647612899
Replicate 30.80851679582207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145566.p1 GENE.R_Transcript_145566~~R_Transcript_145566.p1 ORF type:complete len:379 (+),score=51.80,PPR_2|PF13041.2|5.9e+02,PPR_2|PF13041.2|30,PPR_2|PF13041.2|5.7e-09,PPR_2|PF13041.2|2.9e-12,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|5.6e-13,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|2.2e-05,PPR|PF01535.16|2e+02,PPR|PF01535.16|5.1e+03,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|14,PPR|PF01535.16|0.00017,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.00034,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|8e-05,PPR_3|PF13812.2|0.00038,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|11,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|3.2e-06,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|2.7e+02 R_Transcript_145566:178-1314(+)
ATGTCACAAAATGTAGCACTAAACCCTCATCTCCAACAACCAACGAAGTTAAACTGTATAACCCACCTCACCTTTTCTCAAATTACTTCCTACCCACCATTTCTAAACCATGAATCTTTGAAAAGGTTCAATCTTTCCACTAAAATCACCTGCCTTTCATCCAGAACCAACAGAAAATCCTTTCCTAAGAATGAAAATTCAGAGGATAAGGAGATTGTTAGGACAGTTTTGAGGAATGTCACTGATAAAAAGCCTTTGGTTTCTACATTGAACAAGTATGTTCAAGTTGTTAGGATGGAGCATTGTTTTATGCTTTTTGAAGAGCTTGGTAAAGGTGATAAGTGGCTTCAATGCCTTGAGGTTTTTAGATGGATGCAGAAACAAAGATGGTATATTGCAGATAATGGTGTATACTCCAAATTGATATCTGTTATGGGGAAAAAGGGACAAACTCGGATGGCAATGTGGCTATTCTCAGAGATGCGCAATAGCGGTTGTCGGCCTGACACTTCTGTTTACAATGCGCTCATAACAGCACACTTACATTCTCGTGATAAATCTAAGGCATTGGACAAAGCACTTGCATCTTTTAATAAGATGAAGGGAATGGAGCGTTGCAAGCCTAATATCGTAACATACAACATTCTGTTAAGAGCTTTTGCTCAAGCACGAAATGTTAATCAAGTTGAGGCTTTGTTCAAAGAGCTTGAAGAGAGCGTAGTTTCTCCTGATGTTTTCACGTTCAATGGTGTGATGGATGCGTATGGAAAAAATGGGATGATAAGAGAAATGGAGTCTGTGTTGTCTCGCATGAAAAGCAATCAGTGTAAGCCTGACGTGATCACTTTCAATTTGTTGATTGATTCCTATGGTAAGAGACAAGAATTTGAGAAGATGGAGCAAGTTTTTAAGAGCTTGTTACGCTCCAAGGAGAAGCCGACACTTCCCACATTTAATTCAATGATCATCAATTACGGAAAGGCACGGCTTAGGGAGAAAGCAGAAACTGTTTTCCAGAAAATGACCACAATGGGGTACACTCCCAACTATATTACATATGAGAGTGCTATTATGATGTATGGTATATTGGTATATGTGATTATATTTCTAGGGCAAGGGAAATGTTTGACAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145566.p1 GENE.R_Transcript_145566~~R_Transcript_145566.p1 ORF type:complete len:379 (+),score=51.80,PPR_2|PF13041.2|5.9e+02,PPR_2|PF13041.2|30,PPR_2|PF13041.2|5.7e-09,PPR_2|PF13041.2|2.9e-12,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|5.6e-13,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|2.2e-05,PPR|PF01535.16|2e+02,PPR|PF01535.16|5.1e+03,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|14,PPR|PF01535.16|0.00017,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.00034,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|8e-05,PPR_3|PF13812.2|0.00038,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|11,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|3.2e-06,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|2.7e+02 R_Transcript_145566:178-1314(+)
MSQNVALNPHLQQPTKLNCITHLTFSQITSYPPFLNHESLKRFNLSTKITCLSSRTNRKSFPKNENSEDKEIVRTVLRNVTDKKPLVSTLNKYVQVVRMEHCFMLFEELGKGDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALDKALASFNKMKGMERCKPNIVTYNILLRAFAQARNVNQVEALFKELEESVVSPDVFTFNGVMDAYGKNGMIREMESVLSRMKSNQCKPDVITFNLLIDSYGKRQEFEKMEQVFKSLLRSKEKPTLPTFNSMIINYGKARLREKAETVFQKMTTMGYTPNYITYESAIMMYGILVYVIIFLGQGKCLTV*

Click here to download the sequence:
Link to NCBI Protein BLAST