Transcript Information: R_Transcript_14580.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.74610668814321
Replicate 22.3537770359143
Replicate 33.6202658301049
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.42441532633873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14580.p1 GENE.R_Transcript_14580~~R_Transcript_14580.p1 ORF type:internal len:361 (+),score=63.69,gag_pre-integrs|PF13976.2|5.9e-13,rve|PF00665.22|5.9e+03,rve|PF00665.22|4e-08 R_Transcript_14580:2-1081(+)
GTGTGCTACAAATGCAAGAAAAAGGGGCACTATGCTCGAGATTGTTGGTCCAAATCAGTAGAAGGGAATACTGCGACATCGGCAACAAAGGAGAGCCAAATTGAAACCAAGTGGGACTTACAAGCGTCCTTTGCGGTGGAAGAAGAAACTAGTTCAATTGAGGAATTAGATTTTGATGGCCAGTCAGTGCCATCTTGCACCACCACACAAGAAGAAATAGCTCTTGCTATCACAAATGGTAACTCAATCAATTACAAAGATGATTGGATCATTGATTCCGGTTGTTCTAATCATATGACCGGAGATAAGGCAAAGTTCGTGAGCATGTCCAAACACAAGCACGGACGAGTGGTGGTGACAGCAAATAACTCGGAGTTGCCAATTACTCATATTGGCAAGGCATCGGTGACACCTCGTTACAACAACAAGCAAATCCAGCTGGAGAATGTCTACCACGTTCCTGGTATGACAAAGAATTTGATGTCAGTTTCACAATTGACAGCATCCGGAAACCATGTAGTTTTCGGACCACATGATGTGAAGGTGTACCATAGTTTGGAAGATATTTCATCTCCTATCATAGAAGGGAGACGATTGGAACCAGTCTACGTGATGTCGGCACAGACGGCATATGTAGACAAAGCAAGGAGAAATGAAACAGCTGATTTATGGCATGCACGTTTGGGGCATGTAAGTTATAACAAGTTTAAGGTAATGATGAAGAAGTCAATGCTCAAGGGTCTTCCTCATCTAGATGTCAAAGAAGACATTGTGTGTGCTGGATGTCAATTTGGAAAAGCACACCAACTACCATATGAAGAGTCAAAGTTCCATGCCAAGATGCCGTTGGAGTTAGTTCACTCTGATGTATTCAGTCCAGTGAAGCAGCAATCGATCAGTGGCTCACGCTACTTGATCACTTTCATTGATGACTTTTCAAGATATGTTTGGATCGATTTCATGAAGGAGAAGTCTGAAGCACTCATCAAATTCAAGAAGTTCAAGGAGATGGTGGAAAAAGAAGTTGGCAACAAGATCAGATGTTTGCGTACGGACAACGGAGGAGAAAAAGGAGGAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14580.p1 GENE.R_Transcript_14580~~R_Transcript_14580.p1 ORF type:internal len:361 (+),score=63.69,gag_pre-integrs|PF13976.2|5.9e-13,rve|PF00665.22|5.9e+03,rve|PF00665.22|4e-08 R_Transcript_14580:2-1081(+)
VCYKCKKKGHYARDCWSKSVEGNTATSATKESQIETKWDLQASFAVEEETSSIEELDFDGQSVPSCTTTQEEIALAITNGNSINYKDDWIIDSGCSNHMTGDKAKFVSMSKHKHGRVVVTANNSELPITHIGKASVTPRYNNKQIQLENVYHVPGMTKNLMSVSQLTASGNHVVFGPHDVKVYHSLEDISSPIIEGRRLEPVYVMSAQTAYVDKARRNETADLWHARLGHVSYNKFKVMMKKSMLKGLPHLDVKEDIVCAGCQFGKAHQLPYEESKFHAKMPLELVHSDVFSPVKQQSISGSRYLITFIDDFSRYVWIDFMKEKSEALIKFKKFKEMVEKEVGNKIRCLRTDNGGEKGGE

Click here to download the sequence:
Link to NCBI Protein BLAST