Transcript Information: R_Transcript_145825.p2


Annotated TAIR IDAT5G57950.1
Annotated Gene Name26S proteasome regulatory subunit, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23460765-23462128 | Forward length=227
E-Value7E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.324129429185
Replicate 229.776571499477
Replicate 325.26682571212
Condition 2: 8 Hour
Replicate 123.595469858254
Replicate 230.085550113595
Replicate 332.672899116696
Condition 3: 24 Hour
Replicate 121.844701422725
Replicate 224.461287133186
Replicate 327.061162158346


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145825.p2 GENE.R_Transcript_145825~~R_Transcript_145825.p2 ORF type:5prime_partial len:165 (+),score=48.70,PDZ_2|PF13180.2|3.6e-08 R_Transcript_145825:2-496(+)
AGACGTCGGCTGGCTGAGCTAAAGAATGATCACAAAGACGTGACAGAGAAGATCAATGTAAATATACAATTTCTCCATGCAGCTCAACCTTCACCTGGAACTCATACCATCATGGAATCAGAAAACTGCAAAGAGACAGATAGTCAGGTTTATAGTTGTCCTTCTGCATCACTGCAGCATGCTCGCACAAGGAATGCTGCTAATGCTGCAGATTCTGATGCTGTTGTCAAAATCCCTTTTGCAATGGTTGATGAAATAGCTGAGGCATCACCTGCAGCAGAAGATGGTTTGCAGCTTGGGGATCAGATTGTGAAATTTGGAGATGTGGAATCTGGAGATAATTTGCTTTCTAGACTGGCATCTGAAGTTCAGGCAAATCAAGGTAGTGCATTAACTGTGGCAGTTATGAGGCAGGGCGCTCTAGTGAACTTGTCTGTTACACCTAGAACATGGCAAGGGAGAGGTTTACTTGGATGCCATTTCAGAATTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145825.p2 GENE.R_Transcript_145825~~R_Transcript_145825.p2 ORF type:5prime_partial len:165 (+),score=48.70,PDZ_2|PF13180.2|3.6e-08 R_Transcript_145825:2-496(+)
RRRLAELKNDHKDVTEKINVNIQFLHAAQPSPGTHTIMESENCKETDSQVYSCPSASLQHARTRNAANAADSDAVVKIPFAMVDEIAEASPAAEDGLQLGDQIVKFGDVESGDNLLSRLASEVQANQGSALTVAVMRQGALVNLSVTPRTWQGRGLLGCHFRIL*

Click here to download the sequence:
Link to NCBI Protein BLAST