Transcript Information: R_Transcript_145846.p1


Annotated TAIR IDAT2G03670.1
Annotated Gene Namecell division cycle 48B
Annotated Gene Symbol(s)CDC48B
Annotation TypeOrtholog
Chromosome Positionchr2:1117595-1120361 | Forward length=603
E-Value1.7E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0283358284349
Replicate 20.44358381161193
Replicate 31.1292053744582
Condition 2: 8 Hour
Replicate 10.34487133728514
Replicate 20.78735499440794
Replicate 30.89479770663879
Condition 3: 24 Hour
Replicate 10.80837349393324
Replicate 20.77659362290765
Replicate 31.3872488886062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145846.p1 GENE.R_Transcript_145846~~R_Transcript_145846.p1 ORF type:3prime_partial len:142 (+),score=28.63,AAA|PF00004.25|1.4e-22,AAA_16|PF13191.2|8.9e-06,AAA_16|PF13191.2|5.8,AAA_22|PF13401.2|0.0051,AAA_22|PF13401.2|3.6 R_Transcript_145846:84-506(+)
ATGGAGAGCAGTACCAACAGCAACGAAACAACGAATTGGAAGGTTGAAGAAGCCATTGCTGGAAACTCTGAAGCACTCAAAGGTCTCAGAGAACTCATTATATGGCCTTTGCTCTACTCTCGCGAAGCACAACTCCTTGGTCTCCAATGGCCTCGTGGATTGCTTCTCTATGGTCCTCCCGGTACTGGCAAGACGAGCTTGGTGCGTGCTGTGGTCAGGGAATGTGATGCCAAGCTAACAATTATTAGTCCACATACTGTCCACAGAGCACATGTTGGAGAAAGTGAGAAAGCCCTCCGTCAAGCATTTTCAGAGGCATCATCCCATGCATTGTCAGGCAAGCCTTCAGTTGTCTTTATTGATGAGATTGATGCCGTCTGTCCTCGTTGTGATTCGAGAAGAGAACAAGAAGCTCGTTTGACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145846.p1 GENE.R_Transcript_145846~~R_Transcript_145846.p1 ORF type:3prime_partial len:142 (+),score=28.63,AAA|PF00004.25|1.4e-22,AAA_16|PF13191.2|8.9e-06,AAA_16|PF13191.2|5.8,AAA_22|PF13401.2|0.0051,AAA_22|PF13401.2|3.6 R_Transcript_145846:84-506(+)
MESSTNSNETTNWKVEEAIAGNSEALKGLRELIIWPLLYSREAQLLGLQWPRGLLLYGPPGTGKTSLVRAVVRECDAKLTIISPHTVHRAHVGESEKALRQAFSEASSHALSGKPSVVFIDEIDAVCPRCDSRREQEARLT

Click here to download the sequence:
Link to NCBI Protein BLAST