Transcript Information: R_Transcript_145925.p5


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6735518902579
Replicate 22.3769396697696
Replicate 32.3050805128204
Condition 2: 8 Hour
Replicate 12.0019889579509
Replicate 22.2501516318174
Replicate 32.1690603885997
Condition 3: 24 Hour
Replicate 12.5989970446457
Replicate 22.2193971210644
Replicate 32.4778533607808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_145925.p5 GENE.R_Transcript_145925~~R_Transcript_145925.p5 ORF type:complete len:159 (+),score=19.12,zf-RVT|PF13966.2|5.7e-16 R_Transcript_145925:4161-4637(+)
ATGATCAGGAAAGTTATTCAGGCCAGAGAAATTAAGGATTATCTTAGTGACTGGAATGTTGTTGTTACCCATGGCAAACTCTCCATTCGCAATGTTTACCTGAACATGCTGGGCCAATTCCCTAAGGTACCATGGCGTAAGTTAATTCTTTCTAACAGAGCGCGGCCTAGGGCCGTGATGACACTGTGGTTGGCTATGTGGAAGCGGCTTCAAACAGCAGACCATTTAAGAGCATGGGGTATGGGAATTGATGATAAATGTGCTTTCTGTAAAACCAACGCTGAACATTCAGATCATATCTTCTTCTACTGTGATTTTGCCCAGCAACTATGGAAACTCATTTTTAGCTGGTATCAAATGCCTTTACCCAGTGACATACAGCAAGCTGTATTACAGGTGGCTAAGAAGAATTCTTCTAAAGCTCGTTTTTTCAGCATGGGTGTTGCAGAGACCATTCACTCCCTCTGGCTGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_145925.p5 GENE.R_Transcript_145925~~R_Transcript_145925.p5 ORF type:complete len:159 (+),score=19.12,zf-RVT|PF13966.2|5.7e-16 R_Transcript_145925:4161-4637(+)
MIRKVIQAREIKDYLSDWNVVVTHGKLSIRNVYLNMLGQFPKVPWRKLILSNRARPRAVMTLWLAMWKRLQTADHLRAWGMGIDDKCAFCKTNAEHSDHIFFYCDFAQQLWKLIFSWYQMPLPSDIQQAVLQVAKKNSSKARFFSMGVAETIHSLWLE*

Click here to download the sequence:
Link to NCBI Protein BLAST