Transcript Information: R_Transcript_146171.p1


Annotated TAIR IDAT3G03700.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:916503-918327 | Forward length=482
E-Value1.5E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7778858072778
Replicate 20.59080499006899
Replicate 31.1403787114968
Condition 2: 8 Hour
Replicate 12.3319871378329
Replicate 23.3880124001796
Replicate 34.3218120524731
Condition 3: 24 Hour
Replicate 11.3913822562245
Replicate 20.9547731121462
Replicate 31.8476633826602


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146171.p1 GENE.R_Transcript_146171~~R_Transcript_146171.p1 ORF type:complete len:462 (+),score=52.08,Choline_transpo|PF04515.8|8.4e+02,Choline_transpo|PF04515.8|8.1e-29 R_Transcript_146171:204-1589(+)
ATGACAAGAACCATGAACTCCGCTGTGACACCATCAAACTCGCCGCTTGAAGAAGCCCCTCAAATGCAGGCGCCTCTTGATCACAAGAATCCCACCAAGCTGGTGGAAGAACAAAGAACCCCAGAAACCACAGAGCCAACGAGTTCAAAGGGAATCAAAATAGCGCTTATAGGCATTGTGTTCTACCTACACTTGGTAGGAGTTTCAGTAGTTGCAGTGATTCTGACAATTAGAGGCTTTGCTTCTAGTCATGCTCGCCGTCATTTCAAGGCCTTGGATTGGTACCCTCCAATGCTAACATCCATTGGATTATCAGGGTTCAGCGGCATAGCGTGGCAAATGGTGACTCATTACAACCCTTCAAAAGCCATCAAATATGCATTTTGGTTAAGCCCTTTGCTGACCTGTGCAATGGGGATCCTGTTCATTTCTAATGACTCTGGCTTGGGGTTGGCTTTTGGGGTTATATTCATCTTGGTAGCTGTTGTGCAGTCTCTTTACGCGTGTTGGGCTAGCCCTCGGTTTAGTCATGCTGTTTCTGTGGTCGCTGTCTCCACTGCTTTCCCCCCTCCTAAGACAATGTCATTCACTGCCTTCTTTGTTGTTGTTATGGTTGTCTATTCTTGTGTTTTGATGGCTGGTGTTGGAGGCGCGACTGCTGCTGGAACTCGGGGTGATAAGGTTTTGATTGCGGTCATCATCATCAGCATGGCCTGGACAATGCAGGTGATCAAGAACATGATTCAGGTAGCCACTTCCTCAGTCAAGTACCTAAACTTTTCCTGTGGTGACGAATCAGACATCTCTAAATCCCTAAGAGCAGCAGCAACGCGGTCATTGGGGACCATCTGTTGGGGTTCAATCTTAGTTCCATTTGTCAGCCTGGTTCGAGGCTCTGCAAGAGCAGTGAGCCTAATAGCAGGCGATTCTGATGAGTTTTTATTCTCCTGCGCTGATTGCTATTCAGGGCTAACCTCGCGGCTAGTCCTGTGTGCCAACCGTTGGGGGTTTGTCCAAGTCGGCGTCTATAAAAAGGGGATAGTCAGGGCCTCAAGCGACACATGGGAGATGTTTCAGAGGGCAGGAATGGAGCACCTGATTGATCTCGATCTGACAAGTTCGTTCTGTTTCTTCTGTGGACTGGCAGGAGGTTCCCTTAGCTCTCTTGCAGGAGGAATTTGGACACTTGTGGTTCATAAAACTTACACAACCGAAATATTAGCTTATAGCTTCTTGACTGGTTACTATGTTAGTAGAATTGCCATGGCTTGGCCTCAAGCTTGTGTTTCGGCTTATCATGTTGCCTTTGCTGAGAATCCTCAAAATGCTCGTTTCGATGCTACTATACCAGTTCGATTGCAGGAGCTCCACAGATTTCAGGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146171.p1 GENE.R_Transcript_146171~~R_Transcript_146171.p1 ORF type:complete len:462 (+),score=52.08,Choline_transpo|PF04515.8|8.4e+02,Choline_transpo|PF04515.8|8.1e-29 R_Transcript_146171:204-1589(+)
MTRTMNSAVTPSNSPLEEAPQMQAPLDHKNPTKLVEEQRTPETTEPTSSKGIKIALIGIVFYLHLVGVSVVAVILTIRGFASSHARRHFKALDWYPPMLTSIGLSGFSGIAWQMVTHYNPSKAIKYAFWLSPLLTCAMGILFISNDSGLGLAFGVIFILVAVVQSLYACWASPRFSHAVSVVAVSTAFPPPKTMSFTAFFVVVMVVYSCVLMAGVGGATAAGTRGDKVLIAVIIISMAWTMQVIKNMIQVATSSVKYLNFSCGDESDISKSLRAAATRSLGTICWGSILVPFVSLVRGSARAVSLIAGDSDEFLFSCADCYSGLTSRLVLCANRWGFVQVGVYKKGIVRASSDTWEMFQRAGMEHLIDLDLTSSFCFFCGLAGGSLSSLAGGIWTLVVHKTYTTEILAYSFLTGYYVSRIAMAWPQACVSAYHVAFAENPQNARFDATIPVRLQELHRFQA*

Click here to download the sequence:
Link to NCBI Protein BLAST