Transcript Information: R_Transcript_146173.p1


Annotated TAIR IDAT3G50780.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18875662-18877341 | Reverse length=520
E-Value9.2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34117684027512
Replicate 20.39245421338875
Replicate 30.21408165977713
Condition 2: 8 Hour
Replicate 10.68651957796015
Replicate 20.62694061236969
Replicate 30.50892366225384
Condition 3: 24 Hour
Replicate 11.2873536763199
Replicate 20.41224782973042
Replicate 30.61367396318404


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146173.p1 GENE.R_Transcript_146173~~R_Transcript_146173.p1 ORF type:3prime_partial len:107 (+),score=27.96 R_Transcript_146173:38-355(+)
ATGATCAATGTTGCAGAAACAATTCGTTTCAACTCCTGCATTCAGGCATGCTTGGCTTACCTAGAAGCTGTGCCTTGGGTTGGCGAAGAGGAAGAGGAAAAAGTGGTTTCTTCAGTTCTAAGACTTCAGAGCGAAGGTGTTGGTGTTAAACCTGTCCTGAAAAGAGTGTCTTCTAACATGTCCAAACCCCCAAAAGACACACTTTCTCAAATAGTGGATCTGGTTCTCAAGAGCAATGAGGAGAGAGGGCGACGTGAGATGAAGTCCATTGTTCTCAAGCTCCTAAGAGAGAACAGCAGCAGCTCAGACTGTGATAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146173.p1 GENE.R_Transcript_146173~~R_Transcript_146173.p1 ORF type:3prime_partial len:107 (+),score=27.96 R_Transcript_146173:38-355(+)
MINVAETIRFNSCIQACLAYLEAVPWVGEEEEEKVVSSVLRLQSEGVGVKPVLKRVSSNMSKPPKDTLSQIVDLVLKSNEERGRREMKSIVLKLLRENSSSSDCDN

Click here to download the sequence:
Link to NCBI Protein BLAST