Transcript Information: R_Transcript_146293.p1


Annotated TAIR IDAT3G47520.1
Annotated Gene Namemalate dehydrogenase
Annotated Gene Symbol(s)MDH
Annotation TypeOrtholog
Chromosome Positionchr3:17513657-17514868 | Forward length=403
E-Value3.1E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0232197684749
Replicate 20.9612764046016
Replicate 31.5455148257645
Condition 2: 8 Hour
Replicate 10.88503126315344
Replicate 22.4246739345864
Replicate 31.6183363685646
Condition 3: 24 Hour
Replicate 11.8808805921492
Replicate 20.79717803218954
Replicate 32.637072853843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146293.p1 GENE.R_Transcript_146293~~R_Transcript_146293.p1 ORF type:complete len:415 (+),score=101.41,Ldh_1_N|PF00056.19|5.1e-47,Ldh_1_N|PF00056.19|8.9e+03,Ldh_1_C|PF02866.14|5.3e-45 R_Transcript_146293:132-1376(+)
ATGGCATTGGCAGCTCAAGCAGCAACTACTTGTTCAATTGGATCTCCTTATGTTAGCCCTAAAGCCAACCTTCCTTGTCAGACAAAATCTTTCAGTCTGAAGTATAATTCACAAAACCCCCTTAGATATTTTAGTGGCCTCAAGGCAGCCAATGGGGTAACTTCTGAATCAGAGACATCGTATTTAGGCAAGGAAAGTATTGCAGCTCTGACAGGTACTTCTGCTCCAAAATCACAAAAATATAGCCGGATTTCCCAATATCGCTTAAACCCCCAAGCATCATCTTACAAAGTGGCTATCCTTGGTGCTGCTGGGGGGATTGGCCAACCCCTATCACTTCTGATCAAAATGTCTCCATTAGTTTCAGACATACATCTTTATGATATAGCCAATGTTAAGGGAGTTACTGCAGACCTCTGTCACTGCAACACACCAGCTCAGGTCCGTAGTTTTACTGGGACTGCTGAGCTGGCCAATTCTTTGACAGGGGTAGATGTTGTCGTTATCCCAGCAGGGGTCCCACGAAAGCCTGGTATGACTCGGGATGACCTGTTCAATGTGAATGCCAGCATTGTCAAGAGTTTGATTGAAGCGGTCGCTGACAATTGCCCTCGAGCATTCATTCATATCATCACCAACCCGGTGAACTCCACAGTGCCTATTGCAGCTGAAGTGCTCAAGCAGAAGGGTGTTTATGACCCGAAGAAGCTCTTTGGGGTCACCACATTGGATGTCGTCAGGTCAAACACATTTGCTGCTCAGAAAAAGAAGTTGAGGCTTATCGACGTTGATGTCCCAGTAGTGGGAGGGCATGCTGGAATTACCATATTACCCCTCCTGTCAAAGACAAGGCCATCAGTGACTTTCAATGATGAGGAAGTGGAGGAGCTGACGGTGAAAATCCAAAATGCAGGGACAGAAGTGGTGGAGGCAAAGGCAGGTGCAGGTTCTGCAACGTTATCAATGGCTTATGCTGCAGCAAGATTCGTGGAGTCATCATTGAGGGCTTTGGATGGAGATCCAGATGTTTATGAATGTGCTTATGTAGAATCAGATCTGACAGATGTTCCTTTCTTTTCATCACGCGTTAAGCTTGGAAAGAAAGGTGTTGAAGCTCTGATCTCTTCGGATTTGCAGGGACTGACTGATTATGAAGCCAAAGCTTTGGAGGCTCTAAAGGCTGAGCTTAAAGCTAGCATTGAAAAAGGAGTGGCTTTTGTGCAGAAGCAACCAGTAGCTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146293.p1 GENE.R_Transcript_146293~~R_Transcript_146293.p1 ORF type:complete len:415 (+),score=101.41,Ldh_1_N|PF00056.19|5.1e-47,Ldh_1_N|PF00056.19|8.9e+03,Ldh_1_C|PF02866.14|5.3e-45 R_Transcript_146293:132-1376(+)
MALAAQAATTCSIGSPYVSPKANLPCQTKSFSLKYNSQNPLRYFSGLKAANGVTSESETSYLGKESIAALTGTSAPKSQKYSRISQYRLNPQASSYKVAILGAAGGIGQPLSLLIKMSPLVSDIHLYDIANVKGVTADLCHCNTPAQVRSFTGTAELANSLTGVDVVVIPAGVPRKPGMTRDDLFNVNASIVKSLIEAVADNCPRAFIHIITNPVNSTVPIAAEVLKQKGVYDPKKLFGVTTLDVVRSNTFAAQKKKLRLIDVDVPVVGGHAGITILPLLSKTRPSVTFNDEEVEELTVKIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDPDVYECAYVESDLTDVPFFSSRVKLGKKGVEALISSDLQGLTDYEAKALEALKAELKASIEKGVAFVQKQPVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST