Transcript Information: R_Transcript_146505.p1


Annotated TAIR IDAT5G45410.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18402071-18403282 | Reverse length=342
E-Value4.2E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9664792188785
Replicate 22.0880298756539
Replicate 31.5186787356565
Condition 2: 8 Hour
Replicate 13.8555091215276
Replicate 23.3973715504564
Replicate 33.1088393880221
Condition 3: 24 Hour
Replicate 13.1075484921478
Replicate 22.1933406631513
Replicate 31.9348247237036


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146505.p1 GENE.R_Transcript_146505~~R_Transcript_146505.p1 ORF type:complete len:362 (+),score=69.41 R_Transcript_146505:232-1317(+)
ATGGACTTCTTCCTTCACAAAATGAAAGAAGAGACATTTCAGTGCCCCTTTGATGAGCAAGATATCCAACGATGTCCCTTCTTGAGGAACATCAGCAAACCCACAAATCTATCTTTTTCGTCCATGAGTCTTCCAGTTGCGTTAACTGGAGGGAAAGGTCCGATATTCGAAGATGGTCCCTACTTTGATTTGGGATTCAAACTTTTCCATGGTAAAGATGGGTTCGTACCTCTCACAAGGATGTCAACCCATTGTGATGATTATCATTTGGAAACTGAGTCTGCTCTTAAGTTTAATCCATTAGCTACGAAAGCAGCCACAATAAGTTTGTCAGCCTTTGGACTTGGTGGTCCATTCGAATTCAATTTTTTCTCTGACAAATCAAAGAAGCAAAAGCAGAAGTCTGGATCATCAGGGGGAAACCACCATTCTTCTAAGGGAGGAAATGCATCAGGACACGAAGCATTGAGCAATGAGTGGCTACAAACTGGGAACTGTCCTATCGCAAAGTCCTATAGGGCTGTCCATCATGTGCTTCCTCTAGTTGCCAAGGCTTTTCAACCACCACCCGGTGTTAAGCTCCACTGCCCTCTAGCTGTAGTAGCTGCGAGGGCTGCCCTTGCTTGGACTGCAATGGTTAAAAACCTCCGCCCCCAGCCGCTACCTGCTAAGATGCTTGTGATCGCAGCACTAGGAATGGCAGCTAATGTGCCCTTGGGGATCTGGAGAGAACACACTCAGAAATTCTCACTGTCATGGTTCGTCGCAGTTCATGCAGCTGTTCCCTTCATAGCCATGCTTCGCAAAGCTGTTGTGATGCCGAAAACTGCCATGGCTTTAACCATTAGTGCCTCTATTCTGGGCCAGGCGATTGGCTCGAGAGCTGAACGTATGCGGCTGAGAGCACTATCTGAAAAGCAAACTGCAACTCTAGAGAAAACAGCTGCCCGTGACTATGCAGGGTATGGTTCTGACCAAGTTGAGGAAGTTGCTAACATCCACTGTGGAACTCAGCAAATGAGGTTGGAAACACTTCCCAGCAAGGGAAATGAGGCTGGCTCTTCTGGCGCTAATGTTTGTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146505.p1 GENE.R_Transcript_146505~~R_Transcript_146505.p1 ORF type:complete len:362 (+),score=69.41 R_Transcript_146505:232-1317(+)
MDFFLHKMKEETFQCPFDEQDIQRCPFLRNISKPTNLSFSSMSLPVALTGGKGPIFEDGPYFDLGFKLFHGKDGFVPLTRMSTHCDDYHLETESALKFNPLATKAATISLSAFGLGGPFEFNFFSDKSKKQKQKSGSSGGNHHSSKGGNASGHEALSNEWLQTGNCPIAKSYRAVHHVLPLVAKAFQPPPGVKLHCPLAVVAARAALAWTAMVKNLRPQPLPAKMLVIAALGMAANVPLGIWREHTQKFSLSWFVAVHAAVPFIAMLRKAVVMPKTAMALTISASILGQAIGSRAERMRLRALSEKQTATLEKTAARDYAGYGSDQVEEVANIHCGTQQMRLETLPSKGNEAGSSGANVCF*

Click here to download the sequence:
Link to NCBI Protein BLAST