Transcript Information: R_Transcript_146530.p1


Annotated TAIR IDAT5G23280.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7843017-7843769 | Forward length=250
E-Value3.7E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5148666672449
Replicate 24.5257043300148
Replicate 33.8852417124216
Condition 2: 8 Hour
Replicate 15.7970068956376
Replicate 22.9235075198723
Replicate 34.2332378125284
Condition 3: 24 Hour
Replicate 14.2183956743485
Replicate 23.1173510799403
Replicate 33.4030353576801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146530.p1 GENE.R_Transcript_146530~~R_Transcript_146530.p1 ORF type:complete len:283 (+),score=68.10,TCP|PF03634.9|3.7e-32 R_Transcript_146530:208-1056(+)
ATGCAGCCACCATCCCAAGAAAAGATGCCAACTTTCCTAAATCATCATCATTACAATAATCTTCATCAACCAAATCCTTATTTAGACATCAAAGAACCCCAAATTCTAAACCCCAACACTAAACAAACGGAAGTTGATGAAAATAGTGTGAAAAACCAAACCCCACCGAAGAGAAAATCAACCAAAGATAGGCACAAAAAGGTTGATGGCAGGGGAAGAAGAATAAGGATGCCAGCTCTTTGTGCTGCAAGAATTTTTCAATTGACAAGAGAATTGGGTCACAAATCAGATGGTGAAACAATTCAATGGCTTTTACAACAATCAGAACAAGCAATTATTGCTGCTACTGGTACTGGAACTACACCAGCTTCTTTTGTTTCCACCACAGCAGGGTCCTCTGTTTCAGAACAGGGGAGCTCTGTTTCTACTGGTGTTCCTTGTTATGGCACTGGAATTGGATCATGGAGCTTGATGAACGGGGATTTGGGTCGAGCCCATTTTCCACCTGGGACATGGGGACCCACTTCCGATGATCCGGGGTTCTCAAGCTCAAGTTCCGGGAGAGAGAATTTGGATTCGGGTCCTAAAATGGGGATCCCAGGAATGGAAATGTCTAATTTGAATATGGGTTTGGTGAATTTTGGTAGTACAAGTTTGGGTAGAAGTGTGGGACAAGAAGAGAGGGATAATTTGAAGCTTGGTTTATCACAAGATGGGCGCATTGGTGTTTTGAATTATGGTGCAATTGATCAAATTTATCAACAATTTAGGCATAGCCAAGGGGGTGTTAATTTCAACAATGATGAACGTCAGCATAGAATTCCTAGTGAAGGTGGTTCCCAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146530.p1 GENE.R_Transcript_146530~~R_Transcript_146530.p1 ORF type:complete len:283 (+),score=68.10,TCP|PF03634.9|3.7e-32 R_Transcript_146530:208-1056(+)
MQPPSQEKMPTFLNHHHYNNLHQPNPYLDIKEPQILNPNTKQTEVDENSVKNQTPPKRKSTKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEQAIIAATGTGTTPASFVSTTAGSSVSEQGSSVSTGVPCYGTGIGSWSLMNGDLGRAHFPPGTWGPTSDDPGFSSSSSGRENLDSGPKMGIPGMEMSNLNMGLVNFGSTSLGRSVGQEERDNLKLGLSQDGRIGVLNYGAIDQIYQQFRHSQGGVNFNNDERQHRIPSEGGSQG*

Click here to download the sequence:
Link to NCBI Protein BLAST