Transcript Information: R_Transcript_146625.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74333325154963
Replicate 20.95005884236643
Replicate 30.10365039636268
Condition 2: 8 Hour
Replicate 10.66477461395236
Replicate 20.40472184327938
Replicate 30.41066992353817
Condition 3: 24 Hour
Replicate 10
Replicate 20.099797551541074
Replicate 30.19807877544704


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146625.p1 GENE.R_Transcript_146625~~R_Transcript_146625.p1 ORF type:5prime_partial len:221 (+),score=16.04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3e-17 R_Transcript_146625:1-663(+)
GGGATTCAAGCATATTGGTCACAACTCTTTATCTTGAAGATAATAGAGGTAATGTGTAGATCCTTTTTTTGGTTAGGCAGTACTTTCATCACAAAGAAAGCCCTCATTGCATGGGATAGGGTTTGTATGCCTAAAGTCATAGGGGGTTTGAATCTCACTAAGATCCAAGCTTGGAACAAAGCTGCAATTTTTAGACTGTTTTGGGACTTGTTAGCTAAGAAGGACAAATTATGGGTGAAGTGGGTTCATGCGTATTACATAAAGCACAACAACCTGGACTTCTTGATCATCCCTCAAGCAGCTAGTTGGATGGTGAGGAAAGTAGTCCAGGCCCGAGAGGTTAAGGAGAGCATTAGGTCTTGGGACGACATTCTTTGTCATGATAAAATCTTAATTCCAAAGGTGTATCTGCATTTAGTTGAGAATTTTCCTAAGGTCCCTTGGAGGAAGGCTATTATAGCTAACAAAGCTAGACCAAGAGTTGTGATTACTCTATGGTTGGCCATGTGGAAACGATTGCGCACTGCTGACAGATTAAAAACCTGGGGCATGAATGTGGATGACATCTGCAGGTTTTGCAATTCTAATTTGGAAACCTCAGAGCATATATTTTTTCATTGTGATTTTGATACGAGGTTGTGGAAGCGAATTTGTAATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146625.p1 GENE.R_Transcript_146625~~R_Transcript_146625.p1 ORF type:5prime_partial len:221 (+),score=16.04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3e-17 R_Transcript_146625:1-663(+)
GIQAYWSQLFILKIIEVMCRSFFWLGSTFITKKALIAWDRVCMPKVIGGLNLTKIQAWNKAAIFRLFWDLLAKKDKLWVKWVHAYYIKHNNLDFLIIPQAASWMVRKVVQAREVKESIRSWDDILCHDKILIPKVYLHLVENFPKVPWRKAIIANKARPRVVITLWLAMWKRLRTADRLKTWGMNVDDICRFCNSNLETSEHIFFHCDFDTRLWKRICNW*

Click here to download the sequence:
Link to NCBI Protein BLAST