Transcript Information: R_Transcript_146878.p1


Annotated TAIR IDAT5G52880.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21432002-21433695 | Reverse length=269
E-Value1.2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1932477868949
Replicate 23.3338720255608
Replicate 32.3216288104209
Condition 2: 8 Hour
Replicate 13.226178151833
Replicate 24.5326111840241
Replicate 33.4954115046016
Condition 3: 24 Hour
Replicate 12.3268047865916
Replicate 20.96864312695103
Replicate 34.4366968959927


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146878.p1 GENE.R_Transcript_146878~~R_Transcript_146878.p1 ORF type:complete len:296 (+),score=48.40,F-box-like|PF12937.3|5.1e-12,F-box|PF00646.29|1.8e-05,F-box|PF00646.29|8.4e+02 R_Transcript_146878:666-1553(+)
ATGGCGGGGGCACTAGAAAGATACCAAAAACTGCAAATAAGAGACTCACTATCTCTATCTCACCGTTACCCAATGGCTTGCAAAGAGCTTGCTGTTATTCTTCGCTTGGCTTATTCTAAATCCCCCAAACCCCTTCAATCTCTTCTTCTTGAAGACACCATCACCGCCTTTCGAACCCTCCCTTCAATGCAGACACAAAGCGCTGTTTCGGCTGCTAATCTTCTCTTCCAGAGTGCAGAGGCTGCGCTCCCAAAGCAGAAACGGGTTCTAGCAGCCGCTGAGTTTAAGCAAGCTAAGATTGCTCATAAAAGACATGGAAAATGTCATCAGGATGACAAAGATCTCATCCAATTACCCCAAGACGTCCTTGTGTATCTCTTCAGTTTCTTGGATATGCAATCTCTGGCTTCCGCTGGGTTGGTCTGCCGCTCATGGAATGTGGCAGCAAATGACAATTATCTCTGGCAGCTCCACTACACAAACCATTTTCGTGATTCAAACAGTTTTTTGAAAGTTGAGGGGCTTCAAAGCGGTCCTTCCACTGAAGATAGGCAATATGCATATTCAGGTGGTGTGTGTGCAGATGCTAACTTGGATTGGAAAGATGTTTTCAGAAGAGCCTACCTAGGTCTTCCATCTTGGAGATACAGGTTTAATAGAGGGTATTGTCGTCGTTGCGATTCAATTGTGTGGCTTAATAACCTGAAATGTCCAAATCAACATTCTGAGCAACGAGCTGAAAATCAGCAGTTGAGGCCTGTATCCCCTAGTCAGATTGTCAGATACATTGTGGATGAGGATTCCCCTTGGTTGATGTATTCTTCAGATAGCGATAGTGATTCGGATGAGGAGCTTGGTTTCAGGTTTTGGTCATTTATTAGACATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146878.p1 GENE.R_Transcript_146878~~R_Transcript_146878.p1 ORF type:complete len:296 (+),score=48.40,F-box-like|PF12937.3|5.1e-12,F-box|PF00646.29|1.8e-05,F-box|PF00646.29|8.4e+02 R_Transcript_146878:666-1553(+)
MAGALERYQKLQIRDSLSLSHRYPMACKELAVILRLAYSKSPKPLQSLLLEDTITAFRTLPSMQTQSAVSAANLLFQSAEAALPKQKRVLAAAEFKQAKIAHKRHGKCHQDDKDLIQLPQDVLVYLFSFLDMQSLASAGLVCRSWNVAANDNYLWQLHYTNHFRDSNSFLKVEGLQSGPSTEDRQYAYSGGVCADANLDWKDVFRRAYLGLPSWRYRFNRGYCRRCDSIVWLNNLKCPNQHSEQRAENQQLRPVSPSQIVRYIVDEDSPWLMYSSDSDSDSDEELGFRFWSFIRH*

Click here to download the sequence:
Link to NCBI Protein BLAST