Transcript Information: R_Transcript_146879.p1


Annotated TAIR IDAT5G52880.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21432002-21433695 | Reverse length=269
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.01531114642
Replicate 22.1857347436525
Replicate 31.8065250470152
Condition 2: 8 Hour
Replicate 11.6993344758341
Replicate 21.6223983670261
Replicate 32.5194664583502
Condition 3: 24 Hour
Replicate 12.824462087951
Replicate 22.4351232213571
Replicate 31.5190205145481


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_146879.p1 GENE.R_Transcript_146879~~R_Transcript_146879.p1 ORF type:complete len:317 (+),score=49.29,F-box-like|PF12937.3|5.6e-12,F-box|PF00646.29|2e-05,F-box|PF00646.29|9.1e+02 R_Transcript_146879:666-1616(+)
ATGGCGGGGGCACTAGAAAGATACCAAAAACTGCAAATAAGAGACTCACTATCTCTATCTCACCGTTACCCAATGGCTTGCAAAGAGCTTGCTGTTATTCTTCGCTTGGCTTATTCTAAATCCCCCAAACCCCTTCAATCTCTTCTTCTTGAAGACACCATCACCGCCTTTCGAACCCTCCCTTCGTATGTTTTTGGATTTCTTGATGTGCAATTATGTGAATACTATAACCAGAATTGCTGTGCTAGAATGCAGACACAAAGCGCTGTTTCGGCTGCTAATCTTCTCTTCCAGAGTGCAGAGGCTGCGCTCCCAAAGCAGAAACGGGTTCTAGCAGCCGCTGAGTTTAAGCAAGCTAAGATTGCTCATAAAAGACATGGAAAATGTCATCAGGATGACAAAGATCTCATCCAATTACCCCAAGACGTCCTTGTGTATCTCTTCAGTTTCTTGGATATGCAATCTCTGGCTTCCGCTGGGTTGGTCTGCCGCTCATGGAATGTGGCAGCAAATGACAATTATCTCTGGCAGCTCCACTACACAAACCATTTTCGTGATTCAAACAGTTTTTTGAAAGTTGAGGGGCTTCAAAGCGGTCCTTCCACTGAAGATAGGCAATATGCATATTCAGGTGGTGTGTGTGCAGATGCTAACTTGGATTGGAAAGATGTTTTCAGAAGAGCCTACCTAGGTCTTCCATCTTGGAGATACAGGTTTAATAGAGGGTATTGTCGTCGTTGCGATTCAATTGTGTGGCTTAATAACCTGAAATGTCCAAATCAACATTCTGAGCAACGAGCTGAAAATCAGCAGTTGAGGCCTGTATCCCCTAGTCAGATTGTCAGATACATTGTGGATGAGGATTCCCCTTGGTTGATGTATTCTTCAGATAGCGATAGTGATTCGGATGAGGAGCTTGGTTTCAGGTTTTGGTCATTTATTAGACATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_146879.p1 GENE.R_Transcript_146879~~R_Transcript_146879.p1 ORF type:complete len:317 (+),score=49.29,F-box-like|PF12937.3|5.6e-12,F-box|PF00646.29|2e-05,F-box|PF00646.29|9.1e+02 R_Transcript_146879:666-1616(+)
MAGALERYQKLQIRDSLSLSHRYPMACKELAVILRLAYSKSPKPLQSLLLEDTITAFRTLPSYVFGFLDVQLCEYYNQNCCARMQTQSAVSAANLLFQSAEAALPKQKRVLAAAEFKQAKIAHKRHGKCHQDDKDLIQLPQDVLVYLFSFLDMQSLASAGLVCRSWNVAANDNYLWQLHYTNHFRDSNSFLKVEGLQSGPSTEDRQYAYSGGVCADANLDWKDVFRRAYLGLPSWRYRFNRGYCRRCDSIVWLNNLKCPNQHSEQRAENQQLRPVSPSQIVRYIVDEDSPWLMYSSDSDSDSDEELGFRFWSFIRH*

Click here to download the sequence:
Link to NCBI Protein BLAST