Transcript Information: R_Transcript_147160.p1


Annotated TAIR IDAT2G41080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17132857-17134554 | Forward length=565
E-Value4.9E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4890401301889
Replicate 21.4633785138632
Replicate 30.83297227622373
Condition 2: 8 Hour
Replicate 11.7807901779815
Replicate 21.2196844640647
Replicate 32.5852293913885
Condition 3: 24 Hour
Replicate 12.2957807227704
Replicate 21.4035164748549
Replicate 31.6581594459771


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147160.p1 GENE.R_Transcript_147160~~R_Transcript_147160.p1 ORF type:complete len:330 (+),score=63.29,DYW_deaminase|PF14432.2|1.1e+04,DYW_deaminase|PF14432.2|3.3e-39,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|2e-09,PPR|PF01535.16|0.022,PPR|PF01535.16|0.12,PPR|PF01535.16|15,PPR|PF01535.16|4e+02,PPR|PF01535.16|3.6e+02,PPR_2|PF13041.2|3.5e-11,PPR_2|PF13041.2|69,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|6.2e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|33,PPR_3|PF13812.2|5.2e+03,PPR_3|PF13812.2|23,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|6.3,PPR_1|PF12854.3|9.6e+02 R_Transcript_147160:1368-2357(+)
ATGTATTCAAGATGTGGGTGTTTAGAAGACTCTATCAAAGCTTTCAGTCAGCGTAAAGACGAAGATATTGTGTTGTGGAGCTCCATGATCTCTGCATATGGATTCCATGGCAAAGGAGAGGAGGCCATTGAGCTCTTTAACAAAATGTTGCAAAAAGGATTTGAGGCAAATGATGTAACTTTCTTGAGCTTATTGTATGCTTGTAGCCACTGTGGAATGAAAGATAAAGGACTCGAATATCTTGACCTGATGGTAAAAGATTATGGATTACAGCCTAGGTTAGAACATTATACTTGTGTTGTTGATCTGCTCGGGCGATGTGGTTGCCTGTCACAAGCAGAAGATATGATAAGATCAATGCCCATAAAGGCAGATGCTGTAATATGGAAGACTCTGTTATCTGCATGTAAAATCCATAGGAATTCAGAAATGGCAAAAAGGATGGCTGAAGAGGTTCTCAACCTTGATCCTATGGATTCTGCTTCCTATGTTTTGCTGTCGAACATCCAGGCCTCTGCTAAGAGGTGGGATGAAGTATCTACTTTGCGAAAAGCCATGAGAGATAGAAGGGTAAAGAAAGAACCAGGAATTAGTTGGTTTGAATTCAAGAATGAGGTTCATCAGTTTGTTATGGGAGACAAGTCTCATCCTAGGTGGTCAGAAATTGATCTGTATCTAAAAGAACTAATGTCAGACATAAAGAAATGTGGTTATGTTCCAGATACTGGATCAGTCTTGCATGAATTGGACATTGAAGAAAAGGAGTACAATTTGGCTAACCATAGTGAGAAGTTGGCCATTGCATTTGCTCTAATGATAACTCCCCCTAGCTTTCCTATAAGGTTGATGAAAAACCTGCGTGTTTGTGGTGACTGTCATGCTGCTATCAAGTACATATCTGAGATAAAAAGCAGAGAGATTATTGTACGTGACACCAGTAGATTTCACCATTTCAAGAATGGCAAATGCTCTTGTGGCGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147160.p1 GENE.R_Transcript_147160~~R_Transcript_147160.p1 ORF type:complete len:330 (+),score=63.29,DYW_deaminase|PF14432.2|1.1e+04,DYW_deaminase|PF14432.2|3.3e-39,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|2e-09,PPR|PF01535.16|0.022,PPR|PF01535.16|0.12,PPR|PF01535.16|15,PPR|PF01535.16|4e+02,PPR|PF01535.16|3.6e+02,PPR_2|PF13041.2|3.5e-11,PPR_2|PF13041.2|69,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|6.2e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|33,PPR_3|PF13812.2|5.2e+03,PPR_3|PF13812.2|23,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|6.3,PPR_1|PF12854.3|9.6e+02 R_Transcript_147160:1368-2357(+)
MYSRCGCLEDSIKAFSQRKDEDIVLWSSMISAYGFHGKGEEAIELFNKMLQKGFEANDVTFLSLLYACSHCGMKDKGLEYLDLMVKDYGLQPRLEHYTCVVDLLGRCGCLSQAEDMIRSMPIKADAVIWKTLLSACKIHRNSEMAKRMAEEVLNLDPMDSASYVLLSNIQASAKRWDEVSTLRKAMRDRRVKKEPGISWFEFKNEVHQFVMGDKSHPRWSEIDLYLKELMSDIKKCGYVPDTGSVLHELDIEEKEYNLANHSEKLAIAFALMITPPSFPIRLMKNLRVCGDCHAAIKYISEIKSREIIVRDTSRFHHFKNGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST