Transcript Information: R_Transcript_147160.p2


Annotated TAIR IDAT2G41080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17132857-17134554 | Forward length=565
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9399282174097
Replicate 20.60858841786371
Replicate 30.44264227238942
Condition 2: 8 Hour
Replicate 10.70973521586218
Replicate 20.21604716754769
Replicate 32.0168456244874
Condition 3: 24 Hour
Replicate 11.3308873755191
Replicate 21.385112877186
Replicate 30.95163933421293


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147160.p2 GENE.R_Transcript_147160~~R_Transcript_147160.p2 ORF type:complete len:207 (+),score=37.89,PPR_2|PF13041.2|34,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|3e-07,PPR_2|PF13041.2|5.7e-07,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.9,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|0.00081,PPR_1|PF12854.3|22,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.00036,PPR_3|PF13812.2|0.43 R_Transcript_147160:355-975(+)
ATGGGCAACCTCCATCTAAGATCAGTTCACCACTGTTCTCTCATTCCCAAAAAATCATTCAACTCTCCTTATTCAACCAAACCCTCAAACACTTCTTCTCGCTTTGTTACTAGTGAGTTGACCTACCTTTGCTTTAAAGGGAATTTGAAACAAGCATTTGAGAGGTTCAAATTTGAAATATGGTCAGACCCAAATCTTTTCTCCCACCTAATCCAAGGTTGCATACCCACAAAGTCACTTCAACTAGCCAAACAGCTTCATGCTTTGATCATCACTTCAGGGTGTTACTTAGACAAGTTTCTCATAAACCACCTGATGAACATGTATGGAAAACTTGGGGCATTGGACACTGCCTTAGCATTGTACAATGTGAATCCAAGGAAAAATATCATGTCGTCCAACATTTTGATTAATGGGTATGTGCAAAATGGTGATTTGGAGAAGGCACAGAAGGTGTTTGACGAAATGCCTGACCATAATGTGGCTACTTGGAATGCCATGGTGACAGGTATGATGCAGTTTGAGCAGAATGAAGAGGGTTTGGAGATGTTTACACGGATGCGCCAACTGGGGTATCCTCCAGATGAGTTTACATTGGGTAGCGGGGATGTGCTGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147160.p2 GENE.R_Transcript_147160~~R_Transcript_147160.p2 ORF type:complete len:207 (+),score=37.89,PPR_2|PF13041.2|34,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|3e-07,PPR_2|PF13041.2|5.7e-07,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.9,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|0.00081,PPR_1|PF12854.3|22,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.00036,PPR_3|PF13812.2|0.43 R_Transcript_147160:355-975(+)
MGNLHLRSVHHCSLIPKKSFNSPYSTKPSNTSSRFVTSELTYLCFKGNLKQAFERFKFEIWSDPNLFSHLIQGCIPTKSLQLAKQLHALIITSGCYLDKFLINHLMNMYGKLGALDTALALYNVNPRKNIMSSNILINGYVQNGDLEKAQKVFDEMPDHNVATWNAMVTGMMQFEQNEEGLEMFTRMRQLGYPPDEFTLGSGDVLV*

Click here to download the sequence:
Link to NCBI Protein BLAST