Transcript Information: R_Transcript_147280.p1


Annotated TAIR IDAT4G00990.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:427035-431535 | Forward length=840
E-Value2E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0114990957275
Replicate 20.63464887908206
Replicate 30.54814611376183
Condition 2: 8 Hour
Replicate 11.0176744877318
Replicate 20.50692175458607
Replicate 30.84585591052181
Condition 3: 24 Hour
Replicate 11.1276504809578
Replicate 20.58332548703038
Replicate 31.405885313642


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147280.p1 GENE.R_Transcript_147280~~R_Transcript_147280.p1 ORF type:5prime_partial len:794 (+),score=211.40,zf-4CXXC_R1|PF10497.5|2.4e-06,zf-4CXXC_R1|PF10497.5|1.1e+02,zf-4CXXC_R1|PF10497.5|3.1e+03 R_Transcript_147280:2-2383(+)
GTGGGTGGGGTTTTAGTTGAGGAGACAATTGAATTTGGGAATGAGGATGTTGGGAAGAGGGTGAGGAAGTTGTTTGAGTCTGATAGTGAGCAAGAGGAGGGTTTTCAGGAGAAAAAGGATGTGGGTTTGGATGTTACTGAATTGGCCATTACAGTTATGGATGATGCAAATGATGTGATTATTTTGCCAAAGAAGAGAGGGAGACCAAAGGGTTCCAAAAACAAGCCAAAATTGAGTCATGTTGGCGGTGCAGAGGTCTGTGGTGATGGTTTGAATGATGTGACTATCATGGAGATTGGGAAGGAAGAGGACGTAGTGGCAGTAGGGTTTAAGGATGATGTAATCGGAGAAGGGGTTGGGAAGCAACATAGCAGCACTCCTAAGGGTTTAAGGTGCAGAAAGAAGGAAGTTATCTCAACTGCTCCTAAGGTTGAGGAGGAAGTTGTGAAGAAATTGGAGAGGCGTGGCCGCCGGCCTAAGGGTTCAAAGAAGAAAAATGATGGGATTGTAGAGATTGAGATTAAGGGTGACTATGATGAAATGGTGAACGTGAAGAAACGTGGCCATTCCAAGGGTTCAAACAGTAGTACAAAAGATGTCATTTTGATTACTGAGGATGGAGAAGAGTTGGGGAAGAAGGTAGAGAGGCGTAGAGAGCCTATGGGTTCTAAGAAAAAAAAGGGTTTGAGTGGGGGTGTCACCACTAAATTCAAAGCACTGAAAGGTTGTAAGAAAAAGATGATGAAATGTGGTATAGCAGAGGGTGTTTCAGCAGTAGTTCCTGAGCCAATGAGTGAGATGGGTAGTGAAGTGGTACAGGTTGCGTATGGTGAAGCTCCCTGCAAGGATGATCCTGAAGAGCTCGAGTCTTCAAAAGACGCTTCGACTGTTGAACCTATGAGTACGAGTGATCCTAGTGTTGGTGGAAATAACAAAGTTAGAGCTAGGTTCCCTAGGAAAAGAAAGCGTGGGCGGCCTAAGGGCTCCAAAAACGAAAGGATAATCGTGGTTAGTGAAATCTTTGACGACATTGTGGGTTCACAGTATGGGGAACAGAACTTGGTTGTGCAGAAGGATATGAGATGCCTGGTGGAATTTCCCGGGCGTTCTGGGAAGAAGCGAGCTGATGCCGGCAATACATTACATGGATCAAAAAACCCGGAGAGACCTAGGAGAAAGGTGGCTAGCTATCAGAAGGCTAATGACATGCAAGAGGGTGTCAATGGGGAGAAGGAACAAAGTTCAATGTGTCACCAGTGCCTCAGGTGCGATAAAAATGGTGTTATTTCTTGCTCGTACTGCAAAAGGAAACGTTATTGTCAGCCCTGCCTCGTGAAGTGGTATCCTGAAAGAACAAGAAAAGAAGTGCAGGAGGCATGTCCATTCTGCCGTGGGATTTGTAATTGCAAAACATGCCTCCAGAAGAACCTAGTTTTGAAGGCCAGACAGAAAGAAGTTCATAGAAAGATGAAAGGACAGAGAATCCTCTACTTGTTGTGCAAAATTAATCCCCTTGTGAGGCAGATACAACAAGAGCAGAGAACTGAGCTACATATGGAAGCTAGAATACAAGGCAAAACAATTAAAGAGGAGGATGTAATGAGGACAAGACTGGATCATGATGACCGGATATACTGTGATAATTGCAATACATCCATTGTAAATTTTCACCGAAGCTGCCCAAGTTCTGTTTGTTCTTATGATCTCTGCCTATCTTGCTGTCGAGAACTAAGAGAAGGTTTGAGGCCTGGTGGCAACTCTTCCTCTCAGCTGATTGTACAAGGTCCCTCAAATCAGACTACAAAGACCCAGATTCCTGGTGATGATACAGTTGAGTGGAAAATAAATATGGATGGTAGCATTCCTTGTCCTCCAGAGGCATGGGGTGGTTGTGGTCTTCACATGCTTGAACTTAGACGCATCTTTGAACCTAACTGGGTAGACGGCCTGACAAAAAGGATGGATGAGGTCATTGCTGATTATCATTTACCAGAGCTAGACTCTACTCGAGGCTGTCCTGTTTGCCTCCACATATTATCTTCAGCTGATGAAAGAAGAGAATTTGATTCAGCTGATGAAAGAAGAGAATCTGATTCAAGAAAGGCTTCTTCAAGGGAGCTGACGCATGATAATTTTCTTTACAGTCCAAGTGCTATGAATCTGACCAAAGACCAAATGGACCATTTCCAAATGCATTGGATGCGTGGTGAACCTGTTGTTGTTAGAGATGTACTTGCAAAAGCGTCTGGACTTAGTTGGGAGCCAATGGTCATGTGCAGGGCTTTTAGGGGAGCCAAAAAAATCATGAAGGAGGATACACTTAATGTGAAGGCCATTGATTGTTTGGATTGGTGTGAGGTACGTGCTAGACTCTCAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147280.p1 GENE.R_Transcript_147280~~R_Transcript_147280.p1 ORF type:5prime_partial len:794 (+),score=211.40,zf-4CXXC_R1|PF10497.5|2.4e-06,zf-4CXXC_R1|PF10497.5|1.1e+02,zf-4CXXC_R1|PF10497.5|3.1e+03 R_Transcript_147280:2-2383(+)
VGGVLVEETIEFGNEDVGKRVRKLFESDSEQEEGFQEKKDVGLDVTELAITVMDDANDVIILPKKRGRPKGSKNKPKLSHVGGAEVCGDGLNDVTIMEIGKEEDVVAVGFKDDVIGEGVGKQHSSTPKGLRCRKKEVISTAPKVEEEVVKKLERRGRRPKGSKKKNDGIVEIEIKGDYDEMVNVKKRGHSKGSNSSTKDVILITEDGEELGKKVERRREPMGSKKKKGLSGGVTTKFKALKGCKKKMMKCGIAEGVSAVVPEPMSEMGSEVVQVAYGEAPCKDDPEELESSKDASTVEPMSTSDPSVGGNNKVRARFPRKRKRGRPKGSKNERIIVVSEIFDDIVGSQYGEQNLVVQKDMRCLVEFPGRSGKKRADAGNTLHGSKNPERPRRKVASYQKANDMQEGVNGEKEQSSMCHQCLRCDKNGVISCSYCKRKRYCQPCLVKWYPERTRKEVQEACPFCRGICNCKTCLQKNLVLKARQKEVHRKMKGQRILYLLCKINPLVRQIQQEQRTELHMEARIQGKTIKEEDVMRTRLDHDDRIYCDNCNTSIVNFHRSCPSSVCSYDLCLSCCRELREGLRPGGNSSSQLIVQGPSNQTTKTQIPGDDTVEWKINMDGSIPCPPEAWGGCGLHMLELRRIFEPNWVDGLTKRMDEVIADYHLPELDSTRGCPVCLHILSSADERREFDSADERRESDSRKASSRELTHDNFLYSPSAMNLTKDQMDHFQMHWMRGEPVVVRDVLAKASGLSWEPMVMCRAFRGAKKIMKEDTLNVKAIDCLDWCEVRARLSR*

Click here to download the sequence:
Link to NCBI Protein BLAST