Transcript Information: R_Transcript_147280.p2


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeOrtholog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value2.3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1639569304458
Replicate 20.73030610143645
Replicate 31.3279268171683
Condition 2: 8 Hour
Replicate 11.3484969101381
Replicate 21.1666547047575
Replicate 31.3679474670437
Condition 3: 24 Hour
Replicate 10.79853242531145
Replicate 21.086780872869
Replicate 31.9667212907067


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147280.p2 GENE.R_Transcript_147280~~R_Transcript_147280.p2 ORF type:complete len:345 (+),score=95.26,JmjC|PF02373.18|2.7e-14 R_Transcript_147280:2527-3561(+)
ATGATGCTTCCTTATAGTGATTATACTCATCCTGAATCTGGTATTCTCAATCTCGCTTCAAAGCTCCCTAATACAACTCCAAAGCCAGATTTGGGACCAAAAACATACATTGCTTATGGTTTCATGGAAGAGCTTGGCAGGGGTGATTCAGTTACAAAATTGCATTGTGACATATCTGATGCGGTAAATGTGCTAGTGCACATGACAAAGGTTGAAATTGGATCATCGGAGAACAAGATCATAAATAACTTGCAAAAAGAATATGAAGCTGAAGATGCCTTTGCGGTGGACAGATGTATGAATCCAAATGAAAACTGTGACACTGGCCTGACGTGTTCTGCTGGTGAAGAGTTTTCCTGTTCTGGTGAAGGTCATTCTTTGGAGTTTCTGGATCCTTGTGGAGTTGAGAATTTAGCCCCTAAGATACTTGGTTCAGATGGGACAGAAGTCTACCCATTTGAAAACTGTGACACTGACTTGGCCTACTCTGCTGCTGAAGACATTCTTTGTGCCGGTGGAGCTGATACTGTAAATAAAGGTGGTCATTCTTTGGAATATCTGGAATCTTCTGGAGTTGAGAATTCAGCCCCCGAGAAACTTGAATCAAACGGAACTAAGGTTTATGGAGGTGCTGTCTGGGATGTTTTCCGCAGGAAAGATGTTCCCAAAATAGTTGAATATCTGAAGAAGCATCAGCAAGAATTTCGCCACATCAACAACCTTCCTGTGAAATCTGCCATTCATCCCATTCATGATCAGATGTTCTATCTGACTGAAAGTCATAAGAAACAGCTGAAGGAAGAGTTTGGTGTAGAACCTTGGACATTTGAACAACACCTGGGTGAGGCTGTTTTCATTCCTGCTGGGTGTCCACATCAAGTGAGAAATAGACAGGTGAAGAAGATGGCGTTGTATGCTGCAAGCGCTGCTCTGAATGAAGCCAGAGAGCTGATGTCAGATCTCGAGCAAGGCTTCACTGAAGCAGTTGCGAGCCCAAACAATGGGCAAGTTGCTGTACTGGCTGATCCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147280.p2 GENE.R_Transcript_147280~~R_Transcript_147280.p2 ORF type:complete len:345 (+),score=95.26,JmjC|PF02373.18|2.7e-14 R_Transcript_147280:2527-3561(+)
MMLPYSDYTHPESGILNLASKLPNTTPKPDLGPKTYIAYGFMEELGRGDSVTKLHCDISDAVNVLVHMTKVEIGSSENKIINNLQKEYEAEDAFAVDRCMNPNENCDTGLTCSAGEEFSCSGEGHSLEFLDPCGVENLAPKILGSDGTEVYPFENCDTDLAYSAAEDILCAGGADTVNKGGHSLEYLESSGVENSAPEKLESNGTKVYGGAVWDVFRRKDVPKIVEYLKKHQQEFRHINNLPVKSAIHPIHDQMFYLTESHKKQLKEEFGVEPWTFEQHLGEAVFIPAGCPHQVRNRQVKKMALYAASAALNEARELMSDLEQGFTEAVASPNNGQVAVLADPL*

Click here to download the sequence:
Link to NCBI Protein BLAST