Transcript Information: R_Transcript_147292.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0430263402696
Replicate 20.38816689845257
Replicate 30.42348590513895
Condition 2: 8 Hour
Replicate 10.53498528456166
Replicate 20.67646365233839
Replicate 30.793179623748
Condition 3: 24 Hour
Replicate 10.38584549962528
Replicate 20.33360895800873
Replicate 30.5517908744596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147292.p1 GENE.R_Transcript_147292~~R_Transcript_147292.p1 ORF type:complete len:595 (+),score=27.12,RVT_1|PF00078.23|2.9e-35,zf-RVT|PF13966.2|3.4e-11 R_Transcript_147292:1525-3309(+)
ATGTTGTGCTCATTCCAAAAAAGAAGAACCCGTCTTTGGTTTCGGATTTTCGCCCTATTAGCCACTAAAACATTAGCTAATAGGCTAAAGTCTATTCTCGCGTCCATTATTTCGGAGAACCAAAGTGCTTTCACACCGGGTCGTTTAATTAGTGACAACATTATGGTGGCCTACGAGATTTTTCACTCCATGCACTGTCATAATGGAGTTAATGGGAGCATGGCTTTGAAGCTCGACATGGCAAAGGCCTATGATCGTGTAGAGTGGCCCTTTTTGGAAAAAATACTGCTAAAAATGGGTTTCAATTCCAGTTGGGTGAATGTGGTGATGAAATGTGTATCTACGGTCTCATACTCTTTTTTGATCAATGGTGAACCAAAGGGTTTCTTGAAACCTACGAGAGGACTCCGCCAAGGAAACCCACTTTCTCCCTATCTTTTCTTATTATGTGCTGAAGGTTTATCCAAGTTAATAACTAATGCAGCTAGTGTAGGGGAGTTTTATGGACATAAAATATGCCAAGAAGCGCCCATGATCACACACTTGCTTTTCGCCGACGACACCATTATTTTTGGCAAGGCGGACGAAGCTCAAGTACAAAAGGTAACCACATTGCTACATCTCTATGAACAAGCCTCAGGTCAACAAATCAACAAGGCCAAGACCACAGTTTCTTTTAGCAAGGGTGTACCACAATCTATGAGACAAAACATAACCCAATTGCTAGGAGTGTCGGAAGTCACTGCCCAGGACAAATACTTAGGATTGCCCACCCATATTGGGAGATCAAAGAAGAAGGCCTTTCTCCCGTTGAAGGACAGGATACAAGGAAAGCTCCAAGGGTGGATGGAGAAATTTCTTTCATGGTCGGGAAAAGAGGTGTTAATCAAAGCGGTAGCCCAAGCCATACCTACTTATGCTATGGGAGTCTTTAAACTTCCGGGAGACTTTTGTAATGAACTCGAAGCATTGGTACGTAAATTTTGGTGGGGGCACAAGGACGGGAAGAGAAAGATCCATTGGATGAAATGGACCAACCTTTGTAAATCAAAGGGGGACGGTGGCCTTGGCTTCAGGGACCTAAGTGCATTCAATGATGCTATGTTAGCCAAACAGCTGTGGAGATTGCTAACTATACCAGACTCGTTGTGTGCTAGATTGTTCCAAGCTCGGTACTACCCGGGGAAGAACCCACTTGAGGTGGAATTGGGGCCGAGACCGAGCTATGTATGGAGGAGCATATGGGGAGCCCGTGAAGTGCTCAAGTTGGGGCTTCAGTGGAGCATAGGCAACGGGGAGAAAGTGAGAGTATGGGATGACCCATGGCTTCCGAGGCCAATCTCTTTTAAGCCTATCCCTACCAAGGCTCACTTGGCACCATCCCTGATGGTCAGCGAGCTGATTAACAAGGAGGCAGGGGAATGGAATGAGGAGGTGCTGCAGGTTTGGTTCATTCAAGCGGACGTGGACATCATAAAAAACATTCCTTTGTGCGACATGTGGCCTTCGGACAGACTAATGTGGCACTACACATCTACAGGTTGTTTCACGGTTCGATCGGCATACCACCTATTTATGGAGCATCGGGAAAGAAATGGGCCAAGTGCAAGCGCACCAAATGAGCATGCTTTTTGGAAACATCTATGGAAACTAGACATCCCTCCGAGAATCAAGAATTTCGGGTGGCGAGCGGCGTCACAATGCCTTCCCACATGTGCGGCAATCGCACGAAGGGTTAATATGCATTCCTCGGCCTGTCAAATTTGTGGCGTTAGAAGATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147292.p1 GENE.R_Transcript_147292~~R_Transcript_147292.p1 ORF type:complete len:595 (+),score=27.12,RVT_1|PF00078.23|2.9e-35,zf-RVT|PF13966.2|3.4e-11 R_Transcript_147292:1525-3309(+)
MLCSFQKRRTRLWFRIFALLATKTLANRLKSILASIISENQSAFTPGRLISDNIMVAYEIFHSMHCHNGVNGSMALKLDMAKAYDRVEWPFLEKILLKMGFNSSWVNVVMKCVSTVSYSFLINGEPKGFLKPTRGLRQGNPLSPYLFLLCAEGLSKLITNAASVGEFYGHKICQEAPMITHLLFADDTIIFGKADEAQVQKVTTLLHLYEQASGQQINKAKTTVSFSKGVPQSMRQNITQLLGVSEVTAQDKYLGLPTHIGRSKKKAFLPLKDRIQGKLQGWMEKFLSWSGKEVLIKAVAQAIPTYAMGVFKLPGDFCNELEALVRKFWWGHKDGKRKIHWMKWTNLCKSKGDGGLGFRDLSAFNDAMLAKQLWRLLTIPDSLCARLFQARYYPGKNPLEVELGPRPSYVWRSIWGAREVLKLGLQWSIGNGEKVRVWDDPWLPRPISFKPIPTKAHLAPSLMVSELINKEAGEWNEEVLQVWFIQADVDIIKNIPLCDMWPSDRLMWHYTSTGCFTVRSAYHLFMEHRERNGPSASAPNEHAFWKHLWKLDIPPRIKNFGWRAASQCLPTCAAIARRVNMHSSACQICGVRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST