Transcript Information: R_Transcript_147498.p1


Annotated TAIR IDAT1G16840.4
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5763111-5763984 | Reverse length=161
E-Value8.3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.661677179179
Replicate 216.68936699757
Replicate 321.027210408776
Condition 2: 8 Hour
Replicate 124.360296409054
Replicate 232.337275278022
Replicate 328.204810348601
Condition 3: 24 Hour
Replicate 122.604610193432
Replicate 216.965583761983
Replicate 320.540769013857


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147498.p1 GENE.R_Transcript_147498~~R_Transcript_147498.p1 ORF type:5prime_partial len:195 (+),score=36.52 R_Transcript_147498:2-586(+)
CTTCTCCTTCCATTTCCATTTTCCCCCCTTTATCCACCATCATCATCTTCACCAAAACCCCTCACTCTCTCTCTCTCTCTAATGGCGCGATACTTCACTCAGACCCTAATTAAGCTCCCCCACTCTCTCTCCTCCCCCTCAAAACTCTCTCTCCCCTCATCATCTCGATTATTTGCAAGTAAAGCCCAACTCATCGAACTCGATCTCGATTCTTCCTCTTCTACAGACTCTACACCCGGAGGAGGGGGAGAAGTGGAGGTGATGGGGTTGAAGAGACTTGAGGATGCAATCCACAGTATTATCGTGCGCCGATTAGCACCAGATTGGCTCCCCTTTCGTCCAGGTTCCTCCTACTGGGTCCCCCCCAAACGTAAAGCCGACAATATCCTCGAAGTTGTCGGCAAATTGACCAACCCTTTGACCCCTGAAGAAGCTCTCTCTGTTTCCTCTGCTCGTGGCTGGCCCTCCTCTTCCTATTTCTGTCAAGAAGGTTCAGTCTCTGGACATCCTATTCCTGTGGAGGTAGAAGTGCAGGTCCATGTGCAGGACAGCACAGAGAAATCAATATCTGAGGACGAGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147498.p1 GENE.R_Transcript_147498~~R_Transcript_147498.p1 ORF type:5prime_partial len:195 (+),score=36.52 R_Transcript_147498:2-586(+)
LLLPFPFSPLYPPSSSSPKPLTLSLSLMARYFTQTLIKLPHSLSSPSKLSLPSSSRLFASKAQLIELDLDSSSSTDSTPGGGGEVEVMGLKRLEDAIHSIIVRRLAPDWLPFRPGSSYWVPPKRKADNILEVVGKLTNPLTPEEALSVSSARGWPSSSYFCQEGSVSGHPIPVEVEVQVHVQDSTEKSISEDED*

Click here to download the sequence:
Link to NCBI Protein BLAST