Transcript Information: R_Transcript_147500.p1


Annotated TAIR IDAT1G78890.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29656623-29657537 | Forward length=155
E-Value9E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.385316206438
Replicate 214.913260108772
Replicate 317.768777761501
Condition 2: 8 Hour
Replicate 121.053267057445
Replicate 219.957609493768
Replicate 324.343515177809
Condition 3: 24 Hour
Replicate 121.670453551384
Replicate 222.57056867774
Replicate 316.978312981425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147500.p1 GENE.R_Transcript_147500~~R_Transcript_147500.p1 ORF type:5prime_partial len:214 (+),score=30.06 R_Transcript_147500:2-643(+)
ACCCAACCCCAAGGGCCAAAGCCCACAGTACCGGGAGAAATATCCCTAATCCTTAAAATCCCTCATGTTCCCAACCCTACCCCCCTTAATATCCGTCATCATCCTCACCAAAACCCATTTATTCTCCCTCTCTCTCTAATGGCGCGATACTTCACTCAAACCCTAATCAAGGTCCCCCACTCTCTCTCCTCCCCCTCAAAACTCTCTCTCCCCTCATCATCTCGATTATTTGCAAGTAAAGCCCAACTCATCGAACTCGATCTCGATTCTTCCTCTTCTACAGACTCTACACCCGGAGGAGGGGGAGAAGTGGAGGTGATGGGGTTGAAGAGACTTGAGGATGCAATCCACAGTATTATCGTGCGCCGATTAGCACCAGATTGGCTCCCCTTTCGTCCAGGTTCCTCCTACTGGGTCCCCCCCAAACGTAAAGCCGACAATATCCTCGAAGTTGTCGGCAAATTGACCAACCCTTTGACCCCTGAAGAAGCTCTCTCTGTTTCCTCTGCTCGTGGCTGGCCCTCCTCTTCCTATTTCTGTCAAGAAGGTTCAGTCTCTGGACATCCTATTCCTGTGGAGGTAGAAGTGCAGGTCCATGTGCAGGACAGCACAGAGAAATCAATATCTGAGGACGAGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147500.p1 GENE.R_Transcript_147500~~R_Transcript_147500.p1 ORF type:5prime_partial len:214 (+),score=30.06 R_Transcript_147500:2-643(+)
TQPQGPKPTVPGEISLILKIPHVPNPTPLNIRHHPHQNPFILPLSLMARYFTQTLIKVPHSLSSPSKLSLPSSSRLFASKAQLIELDLDSSSSTDSTPGGGGEVEVMGLKRLEDAIHSIIVRRLAPDWLPFRPGSSYWVPPKRKADNILEVVGKLTNPLTPEEALSVSSARGWPSSSYFCQEGSVSGHPIPVEVEVQVHVQDSTEKSISEDED*

Click here to download the sequence:
Link to NCBI Protein BLAST