Transcript Information: R_Transcript_147588.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeOrtholog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value9E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6718888157911
Replicate 22.4995595733688
Replicate 35.0449362562955
Condition 2: 8 Hour
Replicate 12.4777363339474
Replicate 24.1261151016473
Replicate 32.9172231354193
Condition 3: 24 Hour
Replicate 15.4661445780248
Replicate 23.0194699671624
Replicate 33.2570989117407


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_147588.p1 GENE.R_Transcript_147588~~R_Transcript_147588.p1 ORF type:internal len:168 (-),score=27.22 R_Transcript_147588:3-503(-)
AAGATTGTTAATATCTTAGAAGAGCTTGTTTATGAGAACAAGACAATACTGAAGCAGCATATCCGTGAGTTTCCTCTATTGCCCAGCACTCCAGCATTGGTAAAGGTGAACCAAGTAATACAAGAAGCAAGGGGGTCCATGACATTTAAGGATCAATTGCGAGATGCTGCTGATGGCTTGAATCATGAGAACTTGAATGTGAGGTACATGGTCGTTTGTGAGCTCAGCAAACTACTTAACCTCAGAAAGGAGGATTTGGCAGCAGTGATTAACAATGAAACTGATGTAGATATCACTGTTTTAAGCTCGTTGATTACATCCTTATTAAGGGGATGTGCAGAAGAATCAAGGACTTCAGTTGGTCAAAGGCTTAAGATGGTATGCTCTGATTGTTTAGGAGCTTTAGGTGCAATAGATCCTGCCAAGGTAAAGGGATCGTCATGTCAAAGGTTCAAAATTCAGTGCTCAGATGATGATTTAATTTTTGAACTAATACATAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_147588.p1 GENE.R_Transcript_147588~~R_Transcript_147588.p1 ORF type:internal len:168 (-),score=27.22 R_Transcript_147588:3-503(-)
KIVNILEELVYENKTILKQHIREFPLLPSTPALVKVNQVIQEARGSMTFKDQLRDAADGLNHENLNVRYMVVCELSKLLNLRKEDLAAVINNETDVDITVLSSLITSLLRGCAEESRTSVGQRLKMVCSDCLGALGAIDPAKVKGSSCQRFKIQCSDDDLIFELIHK

Click here to download the sequence:
Link to NCBI Protein BLAST