Transcript Information: R_Transcript_148100.p1


Annotated TAIR IDAT1G78910.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29665269-29667557 | Forward length=478
E-Value2.6E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6058323420574
Replicate 22.0934727687805
Replicate 31.410678854895
Condition 2: 8 Hour
Replicate 12.3695998336044
Replicate 21.5082119716929
Replicate 32.0759906574636
Condition 3: 24 Hour
Replicate 12.2890482279822
Replicate 21.4875981069891
Replicate 32.5674726905451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148100.p1 GENE.R_Transcript_148100~~R_Transcript_148100.p1 ORF type:complete len:341 (+),score=59.19,PseudoU_synth_2|PF00849.18|7.7e-22 R_Transcript_148100:618-1640(+)
ATGAAGGCAGGTGTGAAGATTTATGTGCCTGTATCAATTGCTGAAAGTAGGATTTCCAAGAGATTTGACCCCATACCTAGTGGGACTTTATATCCAAATGCTGATGAAAGAGCGTACTTGCAGAGGCTTGTAATGTATAAGGAATCTGCAATTATTGTGCTTAATAAGCCTCCAAAGTTACCAGTAAAGGGTAATCTGCCCGTCCATAACAGTATGGATGCTTTAGCAGCAGCTGCATTATCCTTTGATTACGAGGAAGGTCCTCAATTGGTACACCGTCTAGACAGAGAAAGCAGTGGCATCATCTTGATGGGGAGGACCAAAGAAAGTGCATCATATCTTCAACGACTATTCACCAATGTTAATATAGCAAAAACATCATGTTCGGCCTGGAATGATGCATGTGAAGCGACTTTCATGAGATATTGGGCATTGGTTATTGGCGCCCCCAAAGAAAAGGAGGGTTTAATTTGTGTCCCTCTTACAAAGGTGCTTCTTGATGATGGAAAAACTGAGAGGGTCATGTTGGCCCATCAATCCGGTTTAGAGGCTTGCCGAGAAGCTGTCACTGAGTATCGGATGCTTGGCCCTATGATCAATGAATGTTCATGGATCGAGCTGCGGCCACATACCAGCAGGAAGCATCAGCTTCGAGTTCACTGTGCTGAAGCTCTTGGCACACCCATTGTTGGCGACTACAAGTATGGTTGGTTTGTACACCAAAGATGGAAGCAAACACCTCAAGTAAACATCGAACCCACAAGTGGAGAGCCTTACAGGTTGCGGCGTCCTGAAGGTTTGGATGTTCAAAAAGGAAGTGTCATGTCAAAAGTTCCATTGTTACACCTCCATTGTAGAGAGCTTGTCCTCCCTAACATTTCAAAATTCATGGGGGTTTTGCAGCATCAGTCAGCTGATCATTACCCCCATCTTAGTACTAAGTCAGATGTCCTTCGGTTTGTGGCATCCATGCCCTCCCACATGAAAATTAGTTGGAATCTAATGTCATCATATTTGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148100.p1 GENE.R_Transcript_148100~~R_Transcript_148100.p1 ORF type:complete len:341 (+),score=59.19,PseudoU_synth_2|PF00849.18|7.7e-22 R_Transcript_148100:618-1640(+)
MKAGVKIYVPVSIAESRISKRFDPIPSGTLYPNADERAYLQRLVMYKESAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSFDYEEGPQLVHRLDRESSGIILMGRTKESASYLQRLFTNVNIAKTSCSAWNDACEATFMRYWALVIGAPKEKEGLICVPLTKVLLDDGKTERVMLAHQSGLEACREAVTEYRMLGPMINECSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQTPQVNIEPTSGEPYRLRRPEGLDVQKGSVMSKVPLLHLHCRELVLPNISKFMGVLQHQSADHYPHLSTKSDVLRFVASMPSHMKISWNLMSSYLV*

Click here to download the sequence:
Link to NCBI Protein BLAST