Transcript Information: R_Transcript_14817.p1


Annotated TAIR IDAT5G40390.1
Annotated Gene NameRaffinose synthase family protein
Annotated Gene Symbol(s)SIP1
Annotation TypeOrtholog
Chromosome Positionchr5:16161720-16165085 | Forward length=783
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 173.595378376251
Replicate 252.732396441956
Replicate 362.80312711784
Condition 2: 8 Hour
Replicate 112.399491712416
Replicate 216.012907712358
Replicate 321.610165585141
Condition 3: 24 Hour
Replicate 130.532122144261
Replicate 218.670820186141
Replicate 330.956267754103


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14817.p1 GENE.R_Transcript_14817~~R_Transcript_14817.p1 ORF type:complete len:782 (+),score=145.59,Raffinose_syn|PF05691.8|0 R_Transcript_14817:365-2710(+)
ATGGCACCAAGTTTGAGCAAGGCAAATTTCGACATGTCGGATGTTGCTGCGAACCATGTTGGCAGGCCATTGGTGACTTTGGAGGGGTCGAACTTCTTTGTCAACGATCACGTGATCCTATCCGACGTCCCTCCCAACATCACCGCGAAGCCGGGCCCATCCGGGCTCTTCGTCGGGTTCAACGCCCCGAATCCCGAGGCCCGACATGAGGTGCCCGTGGGCCAGCTCAAGGGCATCCCCTTCATGAGCATCTTCAGGTTCAAGGTCTGGTGGACCACCCACTGGGTCGGGTCCAACGGGCGGGACCTGGAGCATGAGACCCAGATCCTGGTCCTAGACAAATCCGATGATTGCGGGCCGGGTTCGGGCCGTCCATATGTGACGGTGATCCCCATTGTTGAGGGCCCGTTCCGGGCCTCTCTGCAGCCGGGCCGGGTTGACGATTATGTAGACGTGTGTTTGGAGAGTGGGTCCACGAAAGTGGTGGAGGACTCGTTTGGGGCTGTGCTATATATGCATGCCGGGCCCGACCCGTTTAGGCTGGTGAAGGATGCCATGAGGGTGGTCCAGGCCCATTTAGGGACATTCAAGCACTTGGAGGAGAAATCACCACCAGGTATAGTGGACAAGTTTGGTTGGTGCACATGGGATGCATTTTACCTCAAGGTGGACCCACAGGGTGTTTGGGATGGGGTCCGGGGCCTCGTCGAAAACGGGGCCCCACCCGGACTTGTGCTCATTGACGACGGGTGGCAGTCCATTTGTCATGATGATGATCCAATCAGTGACCAAGAAGGGATGAACCGGACATCTGCTGGTGAGCAGATGCCCTGCAGGCTCATCAAGTATGAGGAGAACTATAAGTTTAGGCACTACACAAGCTCAAAGAAATTGGGCCCAAACGGGCAGCCCAATAAGGGAATGGGTGCCTTTGTAAGGGACCTAAAAGAGGAGTTCAAGAGTGTTGAGCATGTCTATGTTTGGCATGCCTTTATGGGCTACTGGGGTGGGGTTCGCCCGGGTGTTTCGGGCCTTCCTGAGGCCCAGGTCATCAGCCCGAAGCTCTCACCTGGCTTGGAGATGACTATGGAGGATTTGGCTGTTGATAAGATTGTTAATAATGGTGTTGGCTTGGTCTCGCCTGAGAAGGCTCATGAACTGTATGAAGGTTTGCATTCTCACTTAGAGGCTAGTGGCATTGATGGGGTCAAAGTTGATGTTATCCATTTGTTGGAGATGATGGCAGAGGACTATGGAGGGAGAGTAGAGCTTGCGAAGGCATACTACAAGGCGATCACAGAATCCGTTAGGAAGCATTTCAAAGGAAATGGGGTGATTGCTAGCATGGAACAATGCAATGACTTCATGCTTCTTGGTACTGAGACTGTCAGCCTTGGTCGTGTTGGGGATGACTTTTGGCCTACTGATCCATATGGTGATATTAATGGCACATACTGGCTCCAAGGATGTCATATGGTGCATTGTGCCTACAATAGTTTGTGGATGGGCAACTTCATACACCCTGACTGGGACATGTTCCAATCAACCCATCCTTGTGCCGAGTTTCATGCTGCTTCTCGAGCCATCTCTGGCGGTCCAATCTATGTCAGTGATGCTGTTGGCAAGCACAACTTCCCGTTGCTCAAGAAGCTTGTTTTGCCTGATGGCTCGATCCTTCGATGTGATTACTATGCCCTTCCTACTAGGGATTGCCTCTTTGTGGATCCTCTGCATGATGGCAAAACAATGCTCAAAATTTGGAACCTCAACAAGTATACTGGAGTATTGGGAGTGTTCAACTGTCAAGGAGGAGGATGGAGCCGAGAACTCCGAAGAAACCAATGCTTCTCTGAGTATTCCAAGCCAGTTACATGCAGTACAGGCCCAAAAGATGTCGAGTGGAAGAATGGTCGCAAGCCATTCCCTATTGAAGGGGTTGAACAATTTGCCATGTACCTTTCCAAGGAAAAGAAGCTAGTCCTCTCCAAGCCATCAGACGCCATTGAAATGTCGCTGGAACCCTTTAGTTACGAGCTCATCATAGTCTCACCGGTGACAATTTTGCCCTGGCAATCTGTCCATTTTGCTCCTATAGGGCTGGTGAATATGCTCAACTCCGGGGGGGCTATTCAGTCCTTTGACATCTCTGATGACAATGAGGAGAAAATGGTTCAGGTTGGAGTCAAGGGGGCTGGAGAACTGAGGGTTTTCGCGTCAGAAAAACCGAAGGCTTGCAGATTAAATGGGGAAGATATGAGGTTTGAGTATGATGACAGTATGGTTATAATTCAAGTGCCTTGGAATGATGGTGCTGGTGGTTTATCAGCAGTTGAGTACTTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14817.p1 GENE.R_Transcript_14817~~R_Transcript_14817.p1 ORF type:complete len:782 (+),score=145.59,Raffinose_syn|PF05691.8|0 R_Transcript_14817:365-2710(+)
MAPSLSKANFDMSDVAANHVGRPLVTLEGSNFFVNDHVILSDVPPNITAKPGPSGLFVGFNAPNPEARHEVPVGQLKGIPFMSIFRFKVWWTTHWVGSNGRDLEHETQILVLDKSDDCGPGSGRPYVTVIPIVEGPFRASLQPGRVDDYVDVCLESGSTKVVEDSFGAVLYMHAGPDPFRLVKDAMRVVQAHLGTFKHLEEKSPPGIVDKFGWCTWDAFYLKVDPQGVWDGVRGLVENGAPPGLVLIDDGWQSICHDDDPISDQEGMNRTSAGEQMPCRLIKYEENYKFRHYTSSKKLGPNGQPNKGMGAFVRDLKEEFKSVEHVYVWHAFMGYWGGVRPGVSGLPEAQVISPKLSPGLEMTMEDLAVDKIVNNGVGLVSPEKAHELYEGLHSHLEASGIDGVKVDVIHLLEMMAEDYGGRVELAKAYYKAITESVRKHFKGNGVIASMEQCNDFMLLGTETVSLGRVGDDFWPTDPYGDINGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDAVGKHNFPLLKKLVLPDGSILRCDYYALPTRDCLFVDPLHDGKTMLKIWNLNKYTGVLGVFNCQGGGWSRELRRNQCFSEYSKPVTCSTGPKDVEWKNGRKPFPIEGVEQFAMYLSKEKKLVLSKPSDAIEMSLEPFSYELIIVSPVTILPWQSVHFAPIGLVNMLNSGGAIQSFDISDDNEEKMVQVGVKGAGELRVFASEKPKACRLNGEDMRFEYDDSMVIIQVPWNDGAGGLSAVEYLF*

Click here to download the sequence:
Link to NCBI Protein BLAST