Transcript Information: R_Transcript_148263.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value7E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4743699526043
Replicate 20.53625128764612
Replicate 31.9351467910306
Condition 2: 8 Hour
Replicate 11.29885727618
Replicate 21.2300681562931
Replicate 31.569097971114
Condition 3: 24 Hour
Replicate 12.4356023384991
Replicate 21.5165698647745
Replicate 32.0640664537742


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148263.p2 GENE.R_Transcript_148263~~R_Transcript_148263.p2 ORF type:complete len:509 (+),score=48.61,RVT_1|PF00078.23|8.8e-14,RVT_1|PF00078.23|0.0016 R_Transcript_148263:2249-3775(+)
ATGGGGCCTACGAAGGCGCCTGGTCCTAATGGTATACATGCCCTGTTTTACCAGAACCAATGGGAAAATATAAGCCCAGACATAATACAATTTGTTCAAGCAACTTTCAGGGATAAAAAGTTCCATGAGGCCATCGATTCCTTCCTCATATGCCTTGTTCCCAAAATCCCTAATCCTGAAAAAATTAAACAATTCAGATCAATAGGCCTCTGTAATTCTATATACAAGATTATCACCAAAATTCTTGTGTTTAGACTTCGACCTTACCTACAGGATCTCATTTCCCCCCTTCAAAATAGCTTCATACCTGGCAGAGGTTCAAATGTCAACTTTATAGTTGCTTCAAAAATCCTTCATTCCATGAATAAAACAAAAGGTCTTAAGGGCTGGTTTGCTTTAAAAATTGACTTGGAAAAGGCATATGATAGACTTGAATGGAGTTTCATTAGGGGTTGTCTTAAATATTTGGACTTTAATGACGACACTCCAGTGCTTCGGTTATTATTAATGGCACTCTTTCTGACTCCTTCATGCCCTCTAGAGGGATTCGCCAGGGGGATCTCCTATCCCCGTATATCTTCATCCTCTGTCTTAATATGCTCTCTAAACTCATCCAAGACTCTTGTGATACTGGGGAGTGGAAAACCCTTTTGTGTAGGGAAAGCCAAAATTCCTATATCTCACCTCCTGTTTGTTGATGACCTCATCCTCTTTGGGGAAGCCTGTCAAGATACATTTTACTCAGTGAGGGATACCCTGAAGCTTTTCTGTAATGCCTCTGGTCAGAAGGTTAATTGTGATAAAAGCAAATTGTTTTTCTCCCCTAACACTCCACCAGCACTTGTGGAGCTGGGGGAGGACATTCTTCAAGTCAAGGCAGGGACTGACCTGGGCCAGTATTTGGGCTTTCCTTTGTCCCCCAAGAGACCCACGAAAAGGCAAGTCCAATTCATTGTGGACAAAGTGAAGAACAAACTTACCAATTGGAAAACAAAATTCCTTTCCAAAGCTGGTCGAATCTGCCTAATCAATTCTACTCTCAATGCTATCCCAAATTATTACCTGCAACAAATAGTTTTACCCAAATCCACTCTCAATGAACTTGATAACATTGTTATTAAATTTCTTTGGGGGGACTCTGAGGATCATAAGAAATTACATTTGGTGGATAAAGAGTTAGTTTTCCTTCCTAAGAATATGGGAGGTCTGGGGATTCGGAGTAACAATCTAATGGGCAAGGTCTTCATGGCCAAAAGAAACTGGAATTTGATGAATGATTCGACCAGCCTAGGTAATCAGGTGTTAAAAAGTAAATTTGTTTGGACCAGGTCAGAAGCGGTTAATTTTAGAAAGGGTTCAACTAATTGGCAGAACCTGGAGAAAGGCTGGGCCCTTTTTAAAAATAATATCTTTTGGCATCTGGGTGATGGTGCTCGAGTCTCCTTTTGGGAAGACAATTGGCCTCACATTGGGCCCATCAGGTCCCTTATTCATGGTCCTCTCTTACCCCCGAAGATATTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148263.p2 GENE.R_Transcript_148263~~R_Transcript_148263.p2 ORF type:complete len:509 (+),score=48.61,RVT_1|PF00078.23|8.8e-14,RVT_1|PF00078.23|0.0016 R_Transcript_148263:2249-3775(+)
MGPTKAPGPNGIHALFYQNQWENISPDIIQFVQATFRDKKFHEAIDSFLICLVPKIPNPEKIKQFRSIGLCNSIYKIITKILVFRLRPYLQDLISPLQNSFIPGRGSNVNFIVASKILHSMNKTKGLKGWFALKIDLEKAYDRLEWSFIRGCLKYLDFNDDTPVLRLLLMALFLTPSCPLEGFARGISYPRISSSSVLICSLNSSKTLVILGSGKPFCVGKAKIPISHLLFVDDLILFGEACQDTFYSVRDTLKLFCNASGQKVNCDKSKLFFSPNTPPALVELGEDILQVKAGTDLGQYLGFPLSPKRPTKRQVQFIVDKVKNKLTNWKTKFLSKAGRICLINSTLNAIPNYYLQQIVLPKSTLNELDNIVIKFLWGDSEDHKKLHLVDKELVFLPKNMGGLGIRSNNLMGKVFMAKRNWNLMNDSTSLGNQVLKSKFVWTRSEAVNFRKGSTNWQNLEKGWALFKNNIFWHLGDGARVSFWEDNWPHIGPIRSLIHGPLLPPKIFA*

Click here to download the sequence:
Link to NCBI Protein BLAST