Transcript Information: R_Transcript_148338.p1


Annotated TAIR IDAT1G10910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3639908-3643974 | Forward length=664
E-Value1E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7008446290722
Replicate 21.3997533610865
Replicate 32.3465438513132
Condition 2: 8 Hour
Replicate 13.0657099202242
Replicate 22.7269368099007
Replicate 34.1615887763814
Condition 3: 24 Hour
Replicate 13.8076363206924
Replicate 22.9765633949885
Replicate 33.6301558992903


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148338.p1 GENE.R_Transcript_148338~~R_Transcript_148338.p1 ORF type:3prime_partial len:615 (+),score=88.22,PPR_2|PF13041.2|0.067,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|3.4e-15,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|1.9e-08,PPR_2|PF13041.2|4.3e-06,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|9.6e+03,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.93,PPR|PF01535.16|0.00011,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|0.8,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.00048,PPR|PF01535.16|0.0013,PPR|PF01535.16|3.6,PPR|PF01535.16|5.2e+03,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|19,PPR_3|PF13812.2|7.6e-05,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.00091,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|1.1e+02,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|3.9e-05,PPR_1|PF12854.3|0.3,PPR_1|PF12854.3|0.02 R_Transcript_148338:141-1844(+)
ATGGAGGGTGGTGGTGCACTGTTGATGAGCAACAATAGCATCAATGGCTATCCCCAAATCGTCATAATCAATGCATTCTCGACAATCCAAACTCGGTTGAGTCTTTACCCTCTCACCATGCCTAAAGCAACCAATTCCGTAAGCGCTTCCGCTAAACCTCACAATAGATCTGCTTCCAATAAAGGCTCTTCCTTAAAAACAGCTCGAAAGCCTCATCTTTTATCTGCGTCAGCACCAAGAGAGGCTGCTCTTACTGACATTCAAACGTCCTCTGACTTGGGCTCTGCTCTAGCCAGGTCTGGAGTAATATTGAAGGCATCAGAGTTTAACCTCATATTACGGAATTTCGGGAGGTCAAGGAGGTGGAAGGAAATTTCTCAGCTATTTGAATGGATGCAGAATCATGAGAAGACCAATGTGGCATCGTATAGCAGCTACATAAAATTCATGGCAGAGAGCAGGAATACTTCAAGGGCTCTTAGTACATATGAGCATATACATGGGGCTATGAGGAATAATGTCTCCATCTGCAATGCTATTCTGAGTTGTTTGGTTAAGAATAACAATTTTGACAAAGCAATCAATTTGTTCAAGCAGATGAAGCAATGCGGTTTACAGCCAGATGTGGTAACATATAGCACGTTGCTTGCAGGTTGCATAAAAGCAGGCAACGGATATAGGAAGGCATTAGTGCTGGTTAAAGAGCTGGAAGCATCTGGGATTTTGATGGACAGTGTGATGTATGGAACCCTCATAGCTGTTTGTGCTTCAAACTGTCAATGTGAGGAGGCAGAGATGTATTTTATCCGTATGAAGGATGAAGGTCATTCCCCTAATCTCTATCATTACAGCTCACTACTCAATGCTTACTCTGTCAGTGGGAACTATCAGAAGGCTGATGAGTTGTTTCAAGGCATGAAAGCTGCAGGGTTGGTGCCGAATGAGGTTGTGTTGACAACTTTGTTAAAAGTCTATGTTAGAGGGGGCTTCTTTGAGAAGTCTAGGCTACTGTTATCTGAGCTGGAAGCCTTGGGCTATGCTGGGGATGAGATGCCTTACTGTCTCTTGATGGATGGTCTCTCGAAATATGGGAAGATAGATGAAGCTAAATTAGTTTTTGACGAGATGAACAAGAGACAAGTCAGATCCGATGGCTATTCACACAGTATTATGATATCAGCATTCTGTAGAGCTGGGCTAGTGGAGGAAGCAAAGAAACTGGCTAGGGATTACGAAGCTATGCATAGTAGATATGACTTGGTCATTTTAAACGTCATGTTATGTGCTTACTGTGGAGCAGGCGACATGGAATGTGTGATGCAAATATTGAGTAAAATGGATAAACTGGGTATAAATCCTGATCAGATTACCTTCCGTACTCTAGTAAAATATTTCTGTAAGGAGAAATTATATCTGCTTGCATATCGTACCATGCAGGACATGCATGCCAAAGGGTATGAACTTGAGGAGGAAATACTATCCTCCTTATTTCTTCATCTTGTTAGAGTTGATGCACACTCTGAGGCATTTTCTGTGTACAATATATTGCGATCTGGTGGAGCAGCTATGTGCGGGACCTTTCATGAGAAGATATTACACATTCTATTGGCAGAAAAGCTCTTGAAAGATGCATATGTGGTGGTCAAGGAAAATGCAAAACTGATTTCTGCACAAGCTGCTAAAAGATTTTTGACTGCATTTACG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148338.p1 GENE.R_Transcript_148338~~R_Transcript_148338.p1 ORF type:3prime_partial len:615 (+),score=88.22,PPR_2|PF13041.2|0.067,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|3.4e-15,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|1.9e-08,PPR_2|PF13041.2|4.3e-06,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|9.6e+03,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.93,PPR|PF01535.16|0.00011,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|0.8,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.00048,PPR|PF01535.16|0.0013,PPR|PF01535.16|3.6,PPR|PF01535.16|5.2e+03,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|19,PPR_3|PF13812.2|7.6e-05,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.00091,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|1.1e+02,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|3.9e-05,PPR_1|PF12854.3|0.3,PPR_1|PF12854.3|0.02 R_Transcript_148338:141-1844(+)
MEGGGALLMSNNSINGYPQIVIINAFSTIQTRLSLYPLTMPKATNSVSASAKPHNRSASNKGSSLKTARKPHLLSASAPREAALTDIQTSSDLGSALARSGVILKASEFNLILRNFGRSRRWKEISQLFEWMQNHEKTNVASYSSYIKFMAESRNTSRALSTYEHIHGAMRNNVSICNAILSCLVKNNNFDKAINLFKQMKQCGLQPDVVTYSTLLAGCIKAGNGYRKALVLVKELEASGILMDSVMYGTLIAVCASNCQCEEAEMYFIRMKDEGHSPNLYHYSSLLNAYSVSGNYQKADELFQGMKAAGLVPNEVVLTTLLKVYVRGGFFEKSRLLLSELEALGYAGDEMPYCLLMDGLSKYGKIDEAKLVFDEMNKRQVRSDGYSHSIMISAFCRAGLVEEAKKLARDYEAMHSRYDLVILNVMLCAYCGAGDMECVMQILSKMDKLGINPDQITFRTLVKYFCKEKLYLLAYRTMQDMHAKGYELEEEILSSLFLHLVRVDAHSEAFSVYNILRSGGAAMCGTFHEKILHILLAEKLLKDAYVVVKENAKLISAQAAKRFLTAFT

Click here to download the sequence:
Link to NCBI Protein BLAST