Transcript Information: R_Transcript_148426.p1


Annotated TAIR IDAT3G26782.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9850594-9852682 | Forward length=659
E-Value9.9e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9947098049318
Replicate 20.34574746194503
Replicate 30.54866437356054
Condition 2: 8 Hour
Replicate 11.4295639714709
Replicate 20.87033372435752
Replicate 32.2010186530709
Condition 3: 24 Hour
Replicate 11.4778229203462
Replicate 22.0140281322234
Replicate 32.129791623725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148426.p1 GENE.R_Transcript_148426~~R_Transcript_148426.p1 ORF type:complete len:668 (+),score=123.68,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.0013,PPR|PF01535.16|6.1e-06,PPR|PF01535.16|0.02,PPR|PF01535.16|7.8e-07,PPR|PF01535.16|3e+03,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.22,PPR|PF01535.16|0.017,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|15,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|0.00015,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|1,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.2e+04,DYW_deaminase|PF14432.2|7.4e-43,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|22,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|2.2,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|77,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|3.1e+03 R_Transcript_148426:287-2290(+)
ATGAGGATTCCCCATTATCGCTCAGTAACATCAATCACCAAACATACATATAAAATCCAGACACCCCATTTTCACCATTACTCAACTGTTCCAAACCCCAACCTCTTAAAACTATTCGACAAGTATGTTGACAAATCCAAAGTCCATTCCTGGAACTCCATCATCGCCGAGCTGGCTCGAAGCGGGGACTCTGTTGAAGCGCTTCGAGCCTTCTCGTCGATGCGAAAACTCTCTCTTCTCCCAAACAGGTCAACATTTCCCTGCACCATCAAGGCTTGCTCTGCCCTCTCGGACCTCCGGTCAGGCCGACAGGCCCACCAGCAGGCGTTGGTATTTGGGTATGAATTGGATCTTTTTGTTTCCTCAGCTTTGATTGACATGTACTCCAAATGTGGGCTTTTGAATGATGCACGTAAGTTGTTCGACGAAATTCCTCTGAGAAATGTGGTGTCTTGGACGTCTATGATCACTGGGTATGTTCAGAATGATGACGCTCATGAGGCTTTGGCTCTTTTTAAGGAGTTTTTGGCTGAGGAGGGTGAGAGGGAAGGGGAGGAAGAGGGGTTTGGTATTGATTCGGTTGTTTTGGTTTCGGTGCTATCAGCTTGTGCTAAAGTTTCTAGCAGGTTTTTAGCTGAAGGGTTACATGGCTTTTCGATAAAGAGGGGTTTTGAGGGGGCGTTGGGTGTGGGGAATACGTTGGTGGACGCATATGCTAAGTGTGGGGCGGTGGGTATGTCGAGGGAGGTGTTTGATGGGATGGTTGAGAAGGATGATGTTTCTTGGAACACCATGATTGCTGTATGTGCACAAAATGGGTTCTCCATTGAAGCAATGGATGTGTTCCGTTCCATGGTGAATGATAGTGATGTAAAATATAATGCTGTGACTTTGTCTGCTGTCTTGCTGGCCTGTGCTCATGCTGGGGCTTTGGTGCTTGGCAAGTGTATACACGATCAGGTTGTTAAGATGGGATTAGAAGAGAATGTTTATGTGGGTACTTCAATTATTGACATGTATTGCAAATGTGGGAGAGTCGCAATGGCAAGGAAAGCATTTGACCGCATGAAGAAGAAGAATGTGAAGACCTGGAGTGCAATGATTGCTGGATATGGTATGCATGGTTATGCTAGAGAAGCACTGGATGTTTTCTATGATATGAAAAGAGCAGGAGTAAAGCCAAATTACATAACCTTTGTGTCAGTTCTAGCCGCTTGTAGCCATGCAGGTTTTGTTGAAGAAGGGTGGGACTGCTTCACAACTATGAGAAAAGAATTCGATGTAGAGCCTGGGGTTGAGCACTATGGTTGTATGGTCGATCTTTTTGGTCGTGCTGGTTCTCTTCAGAAGGCTTTTTATTTGATTAAGGAGATGGCTGTTAAGCCTGATTTTGTGGTGTGGGGTGTTCTCTTAGCTGGGTGCAGGATGCATAAAAATTTGGAGCTAGCAGAAATATCAGCACGAAAATTGTTCGAGTTAGACCCAAGTGATTGTGGGTACTATGTCTTGCTCTCAAATATGTATGCTGATGCTGGAAGGTGGGACGATGTAGAAAGAATCAGAATTTTCATGAAGAATCATGGGTTGATGAAACCGCCAGGATTTAGTTTAGTGGAATTGAAAGGGAGAGTTCACGTGTTTCTGGTTGGCGATAAAGAACATCCTCAACACAAGCAAATTTATGAGTACCTGGAAAAGCTATATGTCAAACTGCAAGAAGCCGGATACATACCTGATAAGACATCGGTTTTTCACGATGTTGACGAAGAAGAAAAGGAGATAGTCCTACGAGCTCACAGCGAAAAGCTTGCAGTTGCTTTTGGACTTATGAACACAGTTCCTGGTACTACAATCCAAGTCATTAAGAACCTGAGAGTCTGTGGTGACTGTCACACTGTGATAAAGCTGATATCCAAGGTTGTTAACCGAGAGATTGTGGTCAGAGATTCTAAACGCTTCCACCATTTCAAAGATGGTTCTTGTTCATGTGGTGACTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148426.p1 GENE.R_Transcript_148426~~R_Transcript_148426.p1 ORF type:complete len:668 (+),score=123.68,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.0013,PPR|PF01535.16|6.1e-06,PPR|PF01535.16|0.02,PPR|PF01535.16|7.8e-07,PPR|PF01535.16|3e+03,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.22,PPR|PF01535.16|0.017,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|15,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|0.00015,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|1,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.2e+04,DYW_deaminase|PF14432.2|7.4e-43,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|22,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|2.2,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|77,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|3.1e+03 R_Transcript_148426:287-2290(+)
MRIPHYRSVTSITKHTYKIQTPHFHHYSTVPNPNLLKLFDKYVDKSKVHSWNSIIAELARSGDSVEALRAFSSMRKLSLLPNRSTFPCTIKACSALSDLRSGRQAHQQALVFGYELDLFVSSALIDMYSKCGLLNDARKLFDEIPLRNVVSWTSMITGYVQNDDAHEALALFKEFLAEEGEREGEEEGFGIDSVVLVSVLSACAKVSSRFLAEGLHGFSIKRGFEGALGVGNTLVDAYAKCGAVGMSREVFDGMVEKDDVSWNTMIAVCAQNGFSIEAMDVFRSMVNDSDVKYNAVTLSAVLLACAHAGALVLGKCIHDQVVKMGLEENVYVGTSIIDMYCKCGRVAMARKAFDRMKKKNVKTWSAMIAGYGMHGYAREALDVFYDMKRAGVKPNYITFVSVLAACSHAGFVEEGWDCFTTMRKEFDVEPGVEHYGCMVDLFGRAGSLQKAFYLIKEMAVKPDFVVWGVLLAGCRMHKNLELAEISARKLFELDPSDCGYYVLLSNMYADAGRWDDVERIRIFMKNHGLMKPPGFSLVELKGRVHVFLVGDKEHPQHKQIYEYLEKLYVKLQEAGYIPDKTSVFHDVDEEEKEIVLRAHSEKLAVAFGLMNTVPGTTIQVIKNLRVCGDCHTVIKLISKVVNREIVVRDSKRFHHFKDGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST