Transcript Information: R_Transcript_148427.p1


Annotated TAIR IDAT3G26782.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9850594-9852682 | Forward length=659
E-Value4.2E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.6066346829749
Replicate 30.36768439159153
Condition 2: 8 Hour
Replicate 10
Replicate 20.43070719437276
Replicate 30
Condition 3: 24 Hour
Replicate 10.88440990925345
Replicate 20.46022209563002
Replicate 30.77292055074116


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148427.p1 GENE.R_Transcript_148427~~R_Transcript_148427.p1 ORF type:complete len:623 (+),score=126.86,PPR|PF01535.16|0.26,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|0.018,PPR|PF01535.16|7.2e-07,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.2,PPR|PF01535.16|0.016,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|14,DYW_deaminase|PF14432.2|6.6e-43,PPR_2|PF13041.2|60,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|2,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|0.94,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|1.1e+04,PPR_3|PF13812.2|79,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|20,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|2e-05,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.087,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|2,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|9.6e-05,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|71,PPR_1|PF12854.3|0.087,PPR_1|PF12854.3|2.8e+03 R_Transcript_148427:411-2279(+)
ATGTTGACAAATCCAAAGTCCATTCCTGGAACTCCATCATCGCCGAGCTGGCTCCAAGTGGGGACTCTGTTGAAGCCCTTCGAGCCTGCGGAAACTCTCTCGCCTCCCAAACCGATCAACATTCCCCTGCACCACCAAGGCTTGCTTTGCTCTCTCGGACCTCCGGTCGGGCCGGCAAGCTCACCAGCAGGCTTGGTATTTGGGTATGATTCGGATCTTTTTGTGTCTTCATCTTTGATTGACATGTACTCAAAATTTGGGCTTTTGAATGATACACGGAAGGTGTTCGACGAAATTCCCCTGAGAAATGTGGTGTCTTGGACGTCTATGATCACTGGGTATGTTCAGAATGATGACGCTCATGAGGCTTTGGCTCTTTTTAAGGAGTTTTTGGCTGAGGAGGGTGAGAGGGAAGGGGAGGAAGAGGGGTTTGGTATTGATTCGGTTGTTTTGGTTTCGGTGCTATCAGCTTGTGCTAAAGTTTCTAGCAGGTTTTTAGCTGAAGGGTTACATGGCTTTTCGATAAAGAGGGGTTTTGAGGGGGCGTTGGGTGTGGGGAATACGTTGGTGGACGCATATGCTAAGTGTGGGGCGGTGGGTATGTCGAGGGAGGTGTTTGATGGGATGGTTGAGAAGGATGATGTTTCTTGGAACACCATGATTGCTGTATGTGCACAAAATGGGTTCTCCATTGAAGCAATGGATGTGTTCCGTTCCATGGTGAATGATAGTGATGTAAAATATAATGCTGTGACTTTGTCTGCTGTCTTGCTGGCCTGTGCTCATGCTGGGGCTTTGGTGCTTGGCAAGTGTATACACGATCAGGTTGTTAAGATGGGATTAGAAGAGAATGTTTATGTGGGTACTTCAATTATTGACATGTATTGCAAATGTGGGAGAGTCGCAATGGCAAGGAAAGCATTTGACCGCATGAAGAAGAAGAATGTGAAGACCTGGAGTGCAATGATTGCTGGATATGGTATGCATGGTTATGCTAGAGAAGCACTGGATGTTTTCTATGATATGAAAAGAGCAGGAGTAAAGCCAAATTACATAACCTTTGTGTCAGTTCTAGCCGCTTGTAGCCATGCAGGTTTTGTTGAAGAAGGGTGGGACTGCTTCACAACTATGAGAAAAGAATTCGATGTAGAGCCTGGGGTTGAGCACTATGGTTGTATGGTCGATCTTTTTGGTCGTGCTGGTTCTCTTCAGAAGGCTTTTTATTTGATTAAGGAGATGGCTGTTAAGCCTGATTTTGTGGTGTGGGGTGTTCTCTTAGCTGGGTGCAGGATGCATAAAAATTTGGAGCTAGCAGAAATATCAGCACGAAAATTGTTCGAGTTAGACCCAAGTGATTGTGGGTACTATGTCTTGCTCTCAAATATGTATGCTGATGCTGGAAGGTGGGACGATGTAGAAAGAATCAGAATTTTCATGAAGAATCATGGGTTGATGAAACCGCCAGGATTTAGTTTAGTGGAATTGAAAGGGAGAGTTCACGTGTTTCTGGTTGGCGATAAAGAACATCCTCAACACAAGCAAATTTATGAGTACCTGGAAAAGCTATATGTCAAACTGCAAGAAGCCGGATACATACCTGATAAGACATCGGTTTTTCACGATGTTGACGAAGAAGAAAAGGAGATAGTCCTACGAGCTCACAGCGAAAAGCTTGCAGTTGCTTTTGGACTTATGAACACAGTTCCTGGTACTACAATCCAAGTCATTAAGAACCTGAGAGTCTGTGGTGACTGTCACACTGTGATAAAGCTGATATCCAAGGTTGTTAACCGAGAGATTGTGGTCAGAGATTCTAAACGCTTCCACCATTTCAAAGATGGTTCTTGTTCATGTGGTGACTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148427.p1 GENE.R_Transcript_148427~~R_Transcript_148427.p1 ORF type:complete len:623 (+),score=126.86,PPR|PF01535.16|0.26,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|0.018,PPR|PF01535.16|7.2e-07,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.2,PPR|PF01535.16|0.016,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|14,DYW_deaminase|PF14432.2|6.6e-43,PPR_2|PF13041.2|60,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|2,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|0.94,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|1.1e+04,PPR_3|PF13812.2|79,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|20,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|2e-05,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.087,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|2,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|9.6e-05,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|71,PPR_1|PF12854.3|0.087,PPR_1|PF12854.3|2.8e+03 R_Transcript_148427:411-2279(+)
MLTNPKSIPGTPSSPSWLQVGTLLKPFEPAETLSPPKPINIPLHHQGLLCSLGPPVGPASSPAGLVFGYDSDLFVSSSLIDMYSKFGLLNDTRKVFDEIPLRNVVSWTSMITGYVQNDDAHEALALFKEFLAEEGEREGEEEGFGIDSVVLVSVLSACAKVSSRFLAEGLHGFSIKRGFEGALGVGNTLVDAYAKCGAVGMSREVFDGMVEKDDVSWNTMIAVCAQNGFSIEAMDVFRSMVNDSDVKYNAVTLSAVLLACAHAGALVLGKCIHDQVVKMGLEENVYVGTSIIDMYCKCGRVAMARKAFDRMKKKNVKTWSAMIAGYGMHGYAREALDVFYDMKRAGVKPNYITFVSVLAACSHAGFVEEGWDCFTTMRKEFDVEPGVEHYGCMVDLFGRAGSLQKAFYLIKEMAVKPDFVVWGVLLAGCRMHKNLELAEISARKLFELDPSDCGYYVLLSNMYADAGRWDDVERIRIFMKNHGLMKPPGFSLVELKGRVHVFLVGDKEHPQHKQIYEYLEKLYVKLQEAGYIPDKTSVFHDVDEEEKEIVLRAHSEKLAVAFGLMNTVPGTTIQVIKNLRVCGDCHTVIKLISKVVNREIVVRDSKRFHHFKDGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST