Transcript Information: R_Transcript_148439.p1


Annotated TAIR IDAT4G34040.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16304638-16307503 | Reverse length=666
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69756538680454
Replicate 21.4710783731164
Replicate 32.1885418085496
Condition 2: 8 Hour
Replicate 10.62384369292344
Replicate 20.9969819929191
Replicate 30.46246141707992
Condition 3: 24 Hour
Replicate 11.3160526436263
Replicate 21.8262316278822
Replicate 30.83647279058206


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148439.p1 GENE.R_Transcript_148439~~R_Transcript_148439.p1 ORF type:5prime_partial len:157 (+),score=6.22,zf-RING_2|PF13639.2|9.1e+03,zf-RING_2|PF13639.2|1.1e-12,zf-rbx1|PF12678.3|2e+03,zf-rbx1|PF12678.3|3.8e-09,zf-RING_11|PF17123.1|8.5e-08,zf-C3HC4_2|PF13923.2|1.4e-06,zf-C3HC4|PF00097.21|9.6e+03,zf-C3HC4|PF00097.21|1.1e-06 R_Transcript_148439:3-473(+)
GTTAAGTGCTTACCAAAAAACAAAATTAGTCCGTTAACTAGACTATATATTTACTCGTTATTACCGTTCTTCTTCCATTGTATTTTATCGACGTTTCTACAGCGTTTCGTGTCTTCCTCCATTGTTACCATCGTTTTTCTTCCGTTGAAGCTCTTGAAGTTGTCTGAGGGCAGTTTGGAGTCTTGGATTTTACGCGAGATTGAGGATACCCAGAAACGAATTACTGAAGTGCAAAAAATCAGAGAGCAAATGGTAGAAACCCAGCTCATGAATTTGAAAATCCATTCTTCTTCTAATGATATTCAAGCTCAGTCTCAGGATGAAATCTGTACAATCTGTCAGATAGAGTACGATCAAGGGGAAGCTTTGACGACCTTGAATTGTGGCCACTATTATCATCTTGATTGTCTTAAAAAATGGCTTCTGGTGAAGAATGTCTGTCCTCTGTGCAAGAGCATTGCTTTGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148439.p1 GENE.R_Transcript_148439~~R_Transcript_148439.p1 ORF type:5prime_partial len:157 (+),score=6.22,zf-RING_2|PF13639.2|9.1e+03,zf-RING_2|PF13639.2|1.1e-12,zf-rbx1|PF12678.3|2e+03,zf-rbx1|PF12678.3|3.8e-09,zf-RING_11|PF17123.1|8.5e-08,zf-C3HC4_2|PF13923.2|1.4e-06,zf-C3HC4|PF00097.21|9.6e+03,zf-C3HC4|PF00097.21|1.1e-06 R_Transcript_148439:3-473(+)
VKCLPKNKISPLTRLYIYSLLPFFFHCILSTFLQRFVSSSIVTIVFLPLKLLKLSEGSLESWILREIEDTQKRITEVQKIREQMVETQLMNLKIHSSSNDIQAQSQDEICTICQIEYDQGEALTTLNCGHYYHLDCLKKWLLVKNVCPLCKSIALE*

Click here to download the sequence:
Link to NCBI Protein BLAST