Transcript Information: R_Transcript_14844.p1


Annotated TAIR IDAT2G07050.1
Annotated Gene Namecycloartenol synthase 1
Annotated Gene Symbol(s)CAS1
Annotation TypeOrtholog
Chromosome Positionchr2:2924629-2930295 | Forward length=759
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.517031410343
Replicate 218.411693587736
Replicate 326.233442226299
Condition 2: 8 Hour
Replicate 121.166895701284
Replicate 220.257783687381
Replicate 331.658618246622
Condition 3: 24 Hour
Replicate 137.056377641398
Replicate 231.420354989342
Replicate 332.392591998589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14844.p1 GENE.R_Transcript_14844~~R_Transcript_14844.p1 ORF type:3prime_partial len:723 (+),score=133.59,SQHop_cyclase_C|PF13243.2|4.5e-05,SQHop_cyclase_C|PF13243.2|1.9e-44,SQHop_cyclase_N|PF13249.2|5.6e-39,SQHop_cyclase_N|PF13249.2|1.4e+02,SQHop_cyclase_N|PF13249.2|31,SQHop_cyclase_N|PF13249.2|7.1,Prenyltrans|PF00432.17|2.6e+02,Prenyltrans|PF00432.17|3e-10,Prenyltrans|PF00432.17|26,Prenyltrans|PF00432.17|7.9e-11,Prenyltrans|PF00432.17|1.7e-09,Prenyltrans|PF00432.17|7.3e+03 R_Transcript_14844:214-2379(+)
ATGTGGAAGTTGAAGATAGCAGAAGGTGGTAGCCCATGGTTAAGAACCACAAACAATCATGTCGGAAGACAAACCTGGGAGTTTGACCCTAATTTTGGAACTCCTGAGGAGATTAGAGAGGTTGAGGAGGCTCGTGAGAACTTTCACGAGCATCGCTTCGAGAAGAAGCATAGTTCAGATTTGCTCATGCGGATTCAGTTTGGGAGGGAGAATCCATGCAATGTGGCCTTACCTCAAGTCAAAATAGAAAATGAGAGTGATGTAACAGAAGAAGCTGTTGCCACCACTCTGAGAAGGGCAATCATCTATCATTCCACTCTTCAGGCACATGATGGACACTGGCCTGGGGATTATGGTGGTCCCATGTTCCTTATGCCTGGCTTGGTAATTGCCTTGTCGGTTTCTGGGGCACTAAATGCAGTCTTGTCACAAGAACATCAACATGAGATTCGTCGCTACCTCTATAACCATCAGAACAAAGATGGTGGATGGGGTTTGCACATTGAGGGGCATAGTACCATGTTTGGTACTGTTTTAACTTATGTTACTTTAAGGTTGCTTGGTGAAGGGATGAATGATGGTGATGGAGCAATGGAGAAAGGGCGTAAATGGATTTTGGAGCATGGAAGTGCCACTGCAATAACATCATGGGGGAAATTGTGGCTTTCAGTACTTGGAGCATTCGAATGGGATGGCAATAATCCACTGCCTCCAGAAATATGGCTGTTGCCATATATACTTCCCATTCATCCAGGAAGAATGTGGTGTCACTGTCGCATGGTTTATTTGCCTATGTCGTACTTGTATGGAAAGAGGTTTGTGGGTCCTATCACACCAACTGTTTTGTCGTTGCGGAAGGAGCTGTACAATGTCCCATATCATGAAATAGATTGGGATAAGGCGCGCAATGAATGTGCAAAGGAAGATTTGTACTATCCTCACCCCTTGGTTCAGGATATACTTTGGGCATCTCTTCACAAGGTTGCTGAGCCTCTCTTAATGCGATGGCCAGCTAAAAGGTTGAGAGAAAAGGCCCTTTATACTGCGATGGAACACATACACTATGAAGATGAGAATACTCGATATGTATGCATTGGTCCTGTGAACAAGGTGCTAAATATGCTTTGTTGTTGGGTGGAAGATCCTAATTCAGAGGCTTTCAAGCTACATATTCCTCGAATTTATGATTATCTTTGGATTGCTGAAGATGGCATGAAAATGCAGGGTTACAATGGCAGTCAATTATGGGACACTGCTTTTGCTGTGCAAGCAATACTTGCCACCAATCTTGTAGAAGAATATGGACAGACTGTTAAGAAAGCACATTCATTTATAAAAAACTCGCAGGTTTTGCTAGATTGCCCAGGTGATCTGAGTTATTGGTACCGCCATATCTCTAAAGGTGCTTGGCCATTCTCTACTGCGGATCACGGTTGGCCCATTTCAGATTGTACTGCAGAAGGATTGAAAGCTGTTCTTTCATTGTCCAAAATTCCGTCAGAAATTGTTGGTGAGCCACTGGAAGTTAACCGTTTGTATGATGCCGTAAATGTAATCCTATCCCTACAGAATGTTGATGGAGGATTTGCAACGTATGAGCTCACACGATCCTACCCCTGGCTAGAGATGATTAACCCAGCTGAAACATTTGGCGATGTTGTCATTGATTATCCTTATGTCGAGTGTACCTCAGCTGCAATCCAAGCCCTAGTATCATTTAGAAGATTGTATCCTGGTCATAGGAGAGACGAGATAGAGGATTGTATCAATCGAGCTGTGAGGTTCATCGAAAAGATACAAGCAGCAGATGGTTCATGGTATGGTTCCTGGGGAGTCTGCTTCACATATGGTACGTGGTTTGGAGTCAAGGGTTTGGTTGCTGCTGGAAAGACCTATGATAACTGCACGAGCATCCAGAAAGCCTGTGCATTTCTGTTGTCGAAACAGCTTGATTGTGGTGGCTGGGGAGAGAGTTACCTTTCATGTCAAAACAAGGTGTACACACATATTGAAGGGAACAAAGGTCATGTAGTCAACACAGGATGGGCCATGCTGGGTCTTATTGGAGCTGGACAGGCTGATAGAGATCCATTGCCATTGCACCGTGGTGCTAGATTTCTAATCAATTCCCAAATGCAAAATGGAGATTTTCCGCAACAGGAGATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14844.p1 GENE.R_Transcript_14844~~R_Transcript_14844.p1 ORF type:3prime_partial len:723 (+),score=133.59,SQHop_cyclase_C|PF13243.2|4.5e-05,SQHop_cyclase_C|PF13243.2|1.9e-44,SQHop_cyclase_N|PF13249.2|5.6e-39,SQHop_cyclase_N|PF13249.2|1.4e+02,SQHop_cyclase_N|PF13249.2|31,SQHop_cyclase_N|PF13249.2|7.1,Prenyltrans|PF00432.17|2.6e+02,Prenyltrans|PF00432.17|3e-10,Prenyltrans|PF00432.17|26,Prenyltrans|PF00432.17|7.9e-11,Prenyltrans|PF00432.17|1.7e-09,Prenyltrans|PF00432.17|7.3e+03 R_Transcript_14844:214-2379(+)
MWKLKIAEGGSPWLRTTNNHVGRQTWEFDPNFGTPEEIREVEEARENFHEHRFEKKHSSDLLMRIQFGRENPCNVALPQVKIENESDVTEEAVATTLRRAIIYHSTLQAHDGHWPGDYGGPMFLMPGLVIALSVSGALNAVLSQEHQHEIRRYLYNHQNKDGGWGLHIEGHSTMFGTVLTYVTLRLLGEGMNDGDGAMEKGRKWILEHGSATAITSWGKLWLSVLGAFEWDGNNPLPPEIWLLPYILPIHPGRMWCHCRMVYLPMSYLYGKRFVGPITPTVLSLRKELYNVPYHEIDWDKARNECAKEDLYYPHPLVQDILWASLHKVAEPLLMRWPAKRLREKALYTAMEHIHYEDENTRYVCIGPVNKVLNMLCCWVEDPNSEAFKLHIPRIYDYLWIAEDGMKMQGYNGSQLWDTAFAVQAILATNLVEEYGQTVKKAHSFIKNSQVLLDCPGDLSYWYRHISKGAWPFSTADHGWPISDCTAEGLKAVLSLSKIPSEIVGEPLEVNRLYDAVNVILSLQNVDGGFATYELTRSYPWLEMINPAETFGDVVIDYPYVECTSAAIQALVSFRRLYPGHRRDEIEDCINRAVRFIEKIQAADGSWYGSWGVCFTYGTWFGVKGLVAAGKTYDNCTSIQKACAFLLSKQLDCGGWGESYLSCQNKVYTHIEGNKGHVVNTGWAMLGLIGAGQADRDPLPLHRGARFLINSQMQNGDFPQQEI

Click here to download the sequence:
Link to NCBI Protein BLAST