Transcript Information: R_Transcript_148515.p1


Annotated TAIR IDAT1G58100.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21512680-21513885 | Reverse length=401
E-Value2.3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47205933503583
Replicate 20.36200517959135
Replicate 30.7898875033156
Condition 2: 8 Hour
Replicate 10.42217008529733
Replicate 21.156597336613
Replicate 30.31295880379977
Condition 3: 24 Hour
Replicate 10.19791213127331
Replicate 20.3802630843203
Replicate 30.75474843747922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148515.p1 GENE.R_Transcript_148515~~R_Transcript_148515.p1 ORF type:3prime_partial len:116 (+),score=30.35,TCP|PF03634.9|1.4e+03,TCP|PF03634.9|7.5e-31 R_Transcript_148515:321-665(+)
ATGGAAGTCAGAGATTCAAACTCTTCTTCTCACCACCAGCACAAACAGATCATCCCTCTTGATGGCTCCACCGCCGCTGCCGCCGCCACCAGCAGAAAGTCTCAGCCGCAGAAGCGGTCGACGAAAGACCGGCATACAAAGGTGGATGGGAGAGGGAGAAGGATACGTATGCCAGCAGCATGTGCAGCTAGAGTATTTCAGTTAACAAGGGAATTAGGACACAAGTCTGATGGTGAGACTATTGAGTGGCTTTTACATGAAGCTGAGCCTGCTATTATTGCTGCTACTGGTATTGGGGGTGGTACAGCTATAGATTTTCAAGAGGATGGGAATAACAGCAATAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148515.p1 GENE.R_Transcript_148515~~R_Transcript_148515.p1 ORF type:3prime_partial len:116 (+),score=30.35,TCP|PF03634.9|1.4e+03,TCP|PF03634.9|7.5e-31 R_Transcript_148515:321-665(+)
MEVRDSNSSSHHQHKQIIPLDGSTAAAAATSRKSQPQKRSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLHEAEPAIIAATGIGGGTAIDFQEDGNNSNN

Click here to download the sequence:
Link to NCBI Protein BLAST