Transcript Information: R_Transcript_148869.p1


Annotated TAIR IDAT3G55420.1
Annotated Gene Nameunknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20547920-20548570 | Forward length=216
E-Value2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0814103756726
Replicate 25.7682144000819
Replicate 35.7057075331076
Condition 2: 8 Hour
Replicate 17.3547286654729
Replicate 26.2250073990114
Replicate 35.0531956305839
Condition 3: 24 Hour
Replicate 16.3070898977209
Replicate 24.6049441639667
Replicate 34.3294360919138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_148869.p1 GENE.R_Transcript_148869~~R_Transcript_148869.p1 ORF type:5prime_partial len:273 (-),score=19.81 R_Transcript_148869:104-922(-)
TCACTTCACCCACTATCTCTACCACTCCTCCCCCCCCGGCCAAAATTACCACCCAGAGCTTCACACAACCACGCCAAAAATCCTTCTTCCCTCCCATCCCCAAAACACAAAACCCAAAAAACAATGGATGAAAGAGAATTAAAGGACAAGAAAAAAAGCAACAAGAAACCCAAACACAAACATCCAAATTACGACCTTTCTTCAACAACCTCAACAACAAAATCAAACCCAGATATTTCCTTCAAGCCAAGCTCAGAAGTAAAGGGCCTCAAATTCGGCGCTCAATTCATCGTCAAATCCTTCACCGTACGCCGTTCACGTCCTCTAGAACTTTCTCTCCTCCTCAACCACACCACCCCCACCACCACCAAAACGACGCCGTTTCCCTCAACTATAGCCTTCATCCCCACCAATTTCACCATCCTGGCCCACCATGCTTGGCACACCCTCACCCTAGGACTCGGCACTAAAAAGTCCAAAGTCGTCATCTTCGTTTTCGACACCGTTTCCGGGAAATCCTCCGTGGATCTGACGTGGCCACCGGAGATTCCGTTGGGTGAAGTCAATAAACAGCTTGTTAGGGGTTTGACTGGTTGGGAGCTTGCCCGGTTCAAGTTCCGTAAAGGGTGTATTACTTTTTATGTTTTTGCGGTTCGGAGGGTCGGAGAGAGAGGGTTCCAGTGTGGTGACGACTTGCGCACTATTCTACAATCGGTTGTTGCTCTGAAGGATTTTCTTGATCATACGGCTATGCTTGCTATGCCTAATCAGAGGTCCATTCACTACTCTTGCAATGGCCATCCTGTTGCTGCTCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_148869.p1 GENE.R_Transcript_148869~~R_Transcript_148869.p1 ORF type:5prime_partial len:273 (-),score=19.81 R_Transcript_148869:104-922(-)
SLHPLSLPLLPPRPKLPPRASHNHAKNPSSLPSPKHKTQKTMDERELKDKKKSNKKPKHKHPNYDLSSTTSTTKSNPDISFKPSSEVKGLKFGAQFIVKSFTVRRSRPLELSLLLNHTTPTTTKTTPFPSTIAFIPTNFTILAHHAWHTLTLGLGTKKSKVVIFVFDTVSGKSSVDLTWPPEIPLGEVNKQLVRGLTGWELARFKFRKGCITFYVFAVRRVGERGFQCGDDLRTILQSVVALKDFLDHTAMLAMPNQRSIHYSCNGHPVAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST